Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4042 ATGTTCCCTGCAAGATCACCTTCATTTTCTCGCCAGAGTCACCACCATTTAACGCTCTTGATTTTCTCAGTTTCGCTCGTACTTCTACTTCAACCTCCGTCGTCACTCGCCATTCGACCCGATGAGTCGGATCGGATCGAACTGGTTGCCAACTCGACCGAGTCCAATGTTACGCTCTCGAAACCCAGGGAAGGAAGCTTCGCGGAAATGATCGATCGAGCTCTCGAGCACGAGTTCACCGAGAACGACCAGAACGAAGTGCCTGATGCGGGGAGCTTCAACAACAGTGTGGCAGAGCAACAGGCTGTACTCGAAACTGTGGCCAGGGTCAAGCCAAAGAAGAACGAGACAAAGGATGAAAAGTCATTTCAACTCCATCATGTATTTAATTTGGATAATGATAATAGAGCTGAAGATACCCCAATGTTGATAGACCGAAAGGATAATGTTTTCATAATATCTAACTTTAAATCCAAGTATCCAGTGCTCCAGCTAGATTTGCGATTGATTTCAGACCTAGTGGTCGCTATAGTTTCGGCAACTTGTGGTGGCGTTGCATTTGCTTTTGCGGGACAACCGGTTATTACTGGATATCTTCTGGCTGGCTCCATAGTTGGACCTGGTGGCTTTAACTTCATTAGTGAAATGGTGCAGGTGGAAACAGTGGCTCAATTTGGTGTAATATTTCTTCTGTTTGCATTGGGCCTGGAGTTCTCGGCAGCTAAGCTTCGTGTTGTTCGAGCAGTTGCTGTTCTAGGAGGGCTACTTCAAATTTTTCTATTTATGTGCATGTGTGGGCTTACTGTATCGTTATGTGGTGGTAAAGCCTCAGAAGGAGTTTTTGTTGGTGCTTTCCTTTCTATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGACAAGAACACTACTAATGCCCTTCACGGACAAGTGACTATTGGGACCCTAATTTTGCAGGATTGTGCTGTTGGATTGCTTTTTGCATTACTTCCTGTTCTGGGTGGCACGTCTGGTGTTTTCCAAGGAGTGTTATCCATGACAAAGCTGTTGGTGACTTTGATTGCATTTCTCTCTGTTCTGTCAATATTGTCTCGTACTTGCCTCCCATGGTTGCTTAAACTGATGATAAGCCTGTCATCCCAGACAAATGAGCTCTATCAGCTGGCGTCTGTTGCCTTCTGCTTGCTTGTAGCCTGGAGTAGTGATAAGCTGGGGCTAAGTCTAGAGTTAGGCTCCTTTGCGGCTGGAGTGATGATTGCAACCACTGATCTGGCTCAACATACACTAGAGCAAATTGAACCTATTCGCAATCTTTTTGCTGCTCTTTTCCTAGCCAGCATTGGAATGTTGATTCATGTTCATTTTCTCTGGAACCATGTTGACATTCTGGTAGCATCTGTAATTTTGGTGATTGTCATAAAAACAATCATAATTGCTTCTGTTGTCAAAGGATTTGGTTACAATAACAAGACTTCAGTACTTGTTGGAATGTCATTGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTAGTTGAGGGTAAACTATATTTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTAACAACTCCTTTACTTTTCAAGCTAATTCCTGCAGTAGTGCATCTCGGTGTGCTATTGAGGTGGTTCTCTCCTGACAGTTCACTGGAGATCGGATATAGTAAGGTAGACATCCTCCGCTCAGAAAGTGGGAAGCAGCGAATAATTTTGATGGACCAAGAATCTCATGATTCTTGA 1782 0.4416 MFPARSPSFSRQSHHHLTLLIFSVSLVLLLQPPSSLAIRPDESDRIELVANSTESNVTLSKPREGSFAEMIDRALEHEFTENDQNEVPDAGSFNNSVAEQQAVLETVARVKPKKNETKDEKSFQLHHVFNLDNDNRAEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFISEMVQVETVAQFGVIFLLFALGLEFSAAKLRVVRAVAVLGGLLQIFLFMCMCGLTVSLCGGKASEGVFVGAFLSMSSTAVVLKFLMDKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSVLSILSRTCLPWLLKLMISLSSQTNELYQLASVAFCLLVAWSSDKLGLSLELGSFAAGVMIATTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSVLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSSLEIGYSKVDILRSESGKQRIILMDQESHDS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4042 593 Pfam Sodium/hydrogen exchanger family 174 543 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo16g4042 593 Gene3D - 167 550 IPR038770 -
Amo16g4042 593 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 593 IPR045158 GO:0015386|GO:0071805|GO:1902600
Amo16g4042 593 PANTHER K(+) EFFLUX ANTIPORTER 6 18 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4042 Amo-Chr16 152648366 152657467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4042 61 593 Antiporters AT5G11800 83.895 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4042 - - gmx:100811030 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4042 16 152648366 152657467 Amo16g4042 16 152648366 152657467 ECH