Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4036 ATGCCCAAAATGAAGCACCTCCTTCGAAAGCTTCACATCGGTGGCGCCACCACCGCCACTCCCACCACCGCCATCCACCACGTGCCGCCGCCGCCGCCGATTATCGCTCCCTCTACTTCTTCCGCTTCCTCTTCCGCTCTCCCCTCTCCCACTCCAATCGTCGTGGATCCAATTCCAAACCCTAGCAGCACCACCACCACCAGCATCAGCAACAGCGAAAACGGCGTCGTTAGTGATTTCGGTTTGTTGGAGGAAGAGGAGTTTCAGATGCAATTGGCTCTCGCGATCAGCGCCTCCGATCCCGATGTCCATAAGGACCCTGAATCTGCGCAGATCGATGCCGCTAAACAGATCAGCCTCGGATATGAAGCTTCTCTTTCTGATACTCAAGGACTCGTTCAGTTTCAGTCCCTTCGTTACTGGAACTATAATATCATTGGTTATGAGGAGAAAGTGATGGATGGATTTTATGATGTTTATGGCATCACATCAAATTTGACTGAGCGGGGAAAGATGCCGTTGTTGGTGGATCTGCAAACTACACCAGTCTCAAGAAATATTGATTGTGAAGTGATTGTGGTGAATCGCACAGTTGATACTCAGCTGAAGCAGCTTGAAGAAAAAGCCTATGCTTTACTTAACGAGTGTGGTGTTTCTGAACTAGGACTAATCTTGAGCGGCTTACTTCAGAAACTTGCTGATATTGTTGTCAGTAAAATGGGTGGACCTGTTGGTAGTGCTGATAAAATCACAAAAAGCTGGGCTGTGAGGAGTCGTGAACTTCGAGATTCCTTAAGATCTATTGTTCTTCCCCTTGGCAGTCTTGATGTTGGACTTTCACGTCACCGAGCCCTACTTTTCAAGGTACTAGCTGATAGGATTAATATTCCCTGTATGCTTGTCAAAGGGAGCTATTACACAGGAACAGATGATGGAGCAGTGAATTTAATTAAAGCAGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGGGCTCTTATTCCAGCTGAGGTACCTAGTAATCAGCTCCAAAACTACAGCTTTGCTGTCAGGGGTTGTGCAGAAATTGTAGGGTTACCTAACACAACACATCCGCTGCTTGCTGATGAAACTGGAGTGCTGGGAACCCCATCTGATCTTGGCAAAATCTCAACCCTGAGGGTCCAGCCAGAAGAACTACTATTAAATATGGGCAGTCAAACAAAACCAGATAAAATACATCATGTTGAAGAAAATGATACAGAAGCATACAAATGCTCTTCACCTACAGAACCATCACCTGCAGAAAAGATCCGTGTAAATAATGTCTCCAAGTATGTCCTCAGTGCAGCAAAGAACCCGGAATTTGCTCAAAAGCTGCACACTGTTCTATTAGAGAGTGGTGCATTACCCCCTTCTGATCTTTTTTCTGATATGAATCTTCAGGATATGGGTGAGCATAAAGTAAATGTAAAAAATGCTGATGCTGTTCAAGCAGACCCAAATGGGTTGTTATTAAGCCATGAGAATTGTCTCATACCCTCTCAAGGGCTAGGCTGCGCCAATAATACTAGGTTATGTAAATCAGCTGACTGGTTAGCTGGACAGAAAAAAGAATTGCATATAGATGCCATTAGATTTTGTAACTCTTTACAGGGTGATAATACAAGGAAGGGGCTTGTAGCTGCTTCTGACAGGATTAATGGTTTAGAGCTATCTAATTCATTAATTGATTCACTTGCTGTCATCGAATCTTCTGAGCCCAAAGCAGCTGTTAATGGGTTTGACTTCTTTGGTGACGATGAAGAAAATAGTTTTCCAAATAAGGTTGAAGCAACTTGTAGCAACACTGGAAGGGGGACAGATTCATCCACTCAAATAAATGAGATGGTCAATGGAGGTGGTATACGACATGATGGTAAAAGCAAGGAAGTTAATCCAGTACTTGGTGAAGGAACAGAATGGGAAATTCAATGGGAAGATCTCTCTGTTGGTGAGCGCATTGGTATTGGTTCTTATGGTGAAGTTTACCGTGCCGATTGTAATGGAACTGAAGTTGCAGTGAAAAAGTTTCTCGACCAAGATTTCTCTGGTGATGCGCTAGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGGCTGCGGCATCCTAATGTCGTGCTTTTCATGGGAGCAATTACTCGCTCTCCACATTTCTCAATCTTAACAGAGTTTCTTCCTAGAGGCAGCTTATACAGGCTATTACATCGGCCCAATGTTCGAATTGATGAGAAGCGGCGGTTGCGTATGGCTCTTGATGTGGCTAAAGGAATGAATTACTTGCATACAAGCAATCCTCCCATTGTCCATCGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGCATTGGGTTGTTAAGGTTTGTGATTTTGGTCTGTCACGGATGAAGCACCATACCTTTTTGTCATCAAAGTCTTGTGCAGGAACGCCTGAGTGGATGGCGCCAGAAGTCTTGAGAAATGAACCAGCCAATGAGAAGTGCGATGTGTATAGTTTTGGCGTAATCTTGTGGGAGTTGGCTACCATGATGATTCCGTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGGTTTCAAAATAAACGGCTTGAAATTCCAGACAATGTGAATCCTGCAGTTGCACAAATAATACGTGATTGCTGGCAAATGGAGCCACATTTGCGGCCATCATTTGCCCAGCTGATGTCTCGTCTCTCCCGTCTTCAACATCTGGTTGCCGGAATAGCAAGCTCCCCACAGTAA 2778 0.4438 MPKMKHLLRKLHIGGATTATPTTAIHHVPPPPPIIAPSTSSASSSALPSPTPIVVDPIPNPSSTTTTSISNSENGVVSDFGLLEEEEFQMQLALAISASDPDVHKDPESAQIDAAKQISLGYEASLSDTQGLVQFQSLRYWNYNIIGYEEKVMDGFYDVYGITSNLTERGKMPLLVDLQTTPVSRNIDCEVIVVNRTVDTQLKQLEEKAYALLNECGVSELGLILSGLLQKLADIVVSKMGGPVGSADKITKSWAVRSRELRDSLRSIVLPLGSLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGALIPAEVPSNQLQNYSFAVRGCAEIVGLPNTTHPLLADETGVLGTPSDLGKISTLRVQPEELLLNMGSQTKPDKIHHVEENDTEAYKCSSPTEPSPAEKIRVNNVSKYVLSAAKNPEFAQKLHTVLLESGALPPSDLFSDMNLQDMGEHKVNVKNADAVQADPNGLLLSHENCLIPSQGLGCANNTRLCKSADWLAGQKKELHIDAIRFCNSLQGDNTRKGLVAASDRINGLELSNSLIDSLAVIESSEPKAAVNGFDFFGDDEENSFPNKVEATCSNTGRGTDSSTQINEMVNGGGIRHDGKSKEVNPVLGEGTEWEIQWEDLSVGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRSPHFSILTEFLPRGSLYRLLHRPNVRIDEKRRLRMALDVAKGMNYLHTSNPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATMMIPWKGLNPMQVVGAVGFQNKRLEIPDNVNPAVAQIIRDCWQMEPHLRPSFAQLMSRLSRLQHLVAGIASSPQ* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4036 925 Pfam Protein tyrosine and serine/threonine kinase 659 910 IPR001245 GO:0004672|GO:0006468
Amo16g4036 925 PRINTS Tyrosine kinase catalytic domain signature 732 745 IPR001245 GO:0004672|GO:0006468
Amo16g4036 925 PRINTS Tyrosine kinase catalytic domain signature 771 789 IPR001245 GO:0004672|GO:0006468
Amo16g4036 925 PRINTS Tyrosine kinase catalytic domain signature 818 828 IPR001245 GO:0004672|GO:0006468
Amo16g4036 925 PRINTS Tyrosine kinase catalytic domain signature 837 859 IPR001245 GO:0004672|GO:0006468
Amo16g4036 925 PRINTS Tyrosine kinase catalytic domain signature 881 903 IPR001245 GO:0004672|GO:0006468
Amo16g4036 925 PANTHER SERINE-THREONINE PROTEIN KINASE 633 919 - -
Amo16g4036 925 PANTHER SERINE-THREONINE PROTEIN KINASE 72 348 - -
Amo16g4036 925 SUPERFAMILY Protein kinase-like (PK-like) 647 909 IPR011009 -
Amo16g4036 925 Pfam Ethylene-responsive protein kinase Le-CTR1 134 337 - -
Amo16g4036 925 Coils Coil 195 215 - -
Amo16g4036 925 Gene3D Transferase(Phosphotransferase) domain 1 737 919 - -
Amo16g4036 925 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 72 348 - -
Amo16g4036 925 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 633 919 - -
Amo16g4036 925 ProSiteProfiles Protein kinase domain profile. 658 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g4036 925 SMART serkin_6 658 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g4036 925 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Amo16g4036 925 MobiDBLite consensus disorder prediction 36 71 - -
Amo16g4036 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Amo16g4036 925 Gene3D Phosphorylase Kinase; domain 1 651 735 - -
Amo16g4036 925 CDD STKc_MAP3K-like 664 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4036 Amo-Chr16 152577118 152585858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4036 612 916 MAP Kinase Kinase Kinase AT5G11850 79.016 2.84e-173 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo16g4036 PK_Tyr_Ser-Thr 6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4036 K04424 - gmx:100779137 1271.14