Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4033 ATGGAACGTGCAAGGAGGCTCGCAAACCGCGCCATTCTGAAGCGCCTCCTCTCTCAAACAAAACAGCACCGTCGCCACGAGCCTCTCTCCAACTCTTCCTCTTCCTCCCCCGTTCTCTACTCTCCCTCCAGATGCGTCTCCACCGTAACTCCCTCTGTTCTCCGCAACAGAGCATCGTTCCATCATTTCTCTCAACAACAAACTCGCCGAATTTCCGTTACTGCCCTCCAGCCCAGCGACACCTTCCCACGCCGCCACAACTCCGCTACCAAAGAAGAACAGAGCAAGATGGCTCAGTCTTGCGGGTTCGACTCTCTTGATTCCCTCATCGACGCCACCGTTCCCAAATCCATTCGCCTCAACGACTTCGCCTTCTCTAAGTTCGATGCAGGATTGACGGAGGGCCAGATGATTGAGCACATGAAGGATTTGGCGTCGAAGAACAAAGTTTTCAAGTCTTTTATTGGAATGGGATATTACAACACTCATGTGCCACCTGTCATCTTGAGGAACATCATGGAAAACCCTGCTTGGTACACGCAGTACACTCCTTACCAGGCTGAGATTTCGCAGGGCCGTCTCGAGTCATTGCTTAATTTCCAGACCATGATCACTGATCTCACTGGCTTGCCTATGTCCAATGCTTCATTGCTTGATGAAGGAACTGCTGCTGCTGAAGCAATGTCTATGTGTAACAACATCCAGAAAGGGAAGAAGAAGACTTTTGTTATTGCAAGTAACTGTCATCCTCAAACAATTGATATATGCAAGACAAGGGCTGCTGGTTTTGATCTTGAGGTTGCCACTGTGGATCTTAAGGATATTGATTACTCAAAAGGTGATGTTTGTGGTGTGCTTGTTCAGTACCCCGGGACTGAGGGTGAGATTCTGGACTATGGGGAGTTTATTAAGAAGGCACATGCTCATGGGGTTAAGGTTGTTATGGCCAGTGATCTCTTGGCACTGACTGTGTTGAAGCCTCCTGGTGAGTTGGGGGCAGATATTGTTGTTGGCTCGGCTCAGAGGTTTGGTGTTCCAATGGGCTATGGAGGGCCCCATGCCGCTTTCTTGGCAACATCACAAGAGTACAAGAGGATGATGCCTGGGAGGATTATTGGTGTCAGTGTTGATTCTTCTGGAAAGTCGGCTTTGAGAATGGCGATGCAAACAAGGGAACAGCATATTCGGAGGGACAAGGCTACTAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAATATGGCTGCTATGTTTGCTGTATATCATGGACCTGAAGGACTTAAGACCATTGCTCAACGCGTTCATGGTCTTGCTGGCGTGTTTGCCCTGGGATTGAAGAAACTTGGAGTAGAAGTTCAGGATCTTCCCTTCTTTGACACTGTGAAGGTTAAGGTTCCCAATGCCCACGCAATCGCTGATGCTGCTGTGGAAAGTGAAATAAACTTGCGAGTTGTAGATGGAAAAACTATAACCGTTGCTTTTGATGAAACAACCTCATTGGAGGATGTTGATACACTTTTCAAAGTCTTTGCTGGTGGCAAGCCAGTTTCCTTCACAGCTGCTTCTCTTGCGCCAGAAGTCGAGTCTGCGATTCCTTCTGGATTAACTAGGGACAGCCCTTATCTGACACACCCTATCTTCAACACGTACCACACTGAGCATGAGTTACTCAGGTACATTCATAGGTTACAATCCAAGGATCTCTCATTATGCCACAGCATGATTCCACTTGGATCTTGTACTATGAAGTTGAATGCAACAACTGAGATGATGCCAGTAACATGGCCCAGCTTCACTGATATTCACCCTTTTGCACCAACTGAACAGGCTCAAGGTTATCAGGAAATGTTTGACAATTTGGGTGACTTGCTGTGTACCATCACCGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGAGCTGCAGGAGAATATGCTGGGCTGATGGTTATTCGAGCATATCATTTGGCAAGAGGAGACCACCACCGCAATGTTTGCATTATACCTGTCTCGGCACATGGTACAAATCCTGCCAGTGCTGCCATGTGTGGCATGAAAATTGTATCTGTGGGAACCGATGCCAAGGGTAACATTAACATTGCAGAGTTGAGGAAGGCCGCTGAAACTCACAAGGACAACTTATCAGCTCTTATGGTAACATATCCCTCAACCCATGGTGTTTATGAAGAGGGTATAGATGAGATTTGCAAGATTATTCATGATAATGGAGGCCAAGTATACATGGATGGTGCCAATATGAATGCACAGGTGGGTCTTACAAGCCCTGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGTATGGGTCCAATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACACCCTGTGGTACCCACTGGTGGAATTCCCGCCCCAGAGAACTCTCAACCTCTTGGTACCATCTCTGCTGCACCTTGGGGCTCAGCACTCATATTGCCAATCTCCTACACTTACATTGCCATGATGGGTTCGAAAGGACTCACCGATGCATCAAAGATAGCCATTTTGAATGCGAACTACATGGCGAAACGATTGGAGAATCATTACCCTGTTCTTTTCCGTGGAGTCAATGGAACTGTTGCTCATGAATTCATCATTGACTTAAGAGGCTTTAAGAACACTGCTGGAATAGAGCCTGAAGACGTTGCAAAGCGCCTCATGGACTATGGCTTTCATGGACCAACAATGTCATGGCCTGTACCTGGCACACTCATGATTGAACCCACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTCTGTGATGCTCTTATTTCCATCAGAGAAGAAATTGCTGAGATAGAGAAAGGAAAAGCTGACATTAACAACAATGTGCTCAAGGGAGCTCCTCATCCACCATCATTGCTCATGGGAGATGCATGGACCAAACCATACTCCAGGGAATATGCAGCCTTCCCAGCTCCCTGGCTCCGCGTCGCAAAGTTCTGGCCTACAACAGGGCGTGTTGATAATGTGTATGGCGACCGCAACCTCATCTGCACCCTTCTGCCGGCAGCACAGGTCGCCGAAGAACAAGCTGCTGCAACCGCATAG 3126 0.477 MERARRLANRAILKRLLSQTKQHRRHEPLSNSSSSSPVLYSPSRCVSTVTPSVLRNRASFHHFSQQQTRRISVTALQPSDTFPRRHNSATKEEQSKMAQSCGFDSLDSLIDATVPKSIRLNDFAFSKFDAGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFVIASNCHPQTIDICKTRAAGFDLEVATVDLKDIDYSKGDVCGVLVQYPGTEGEILDYGEFIKKAHAHGVKVVMASDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKSALRMAMQTREQHIRRDKATSNICTAQALLANMAAMFAVYHGPEGLKTIAQRVHGLAGVFALGLKKLGVEVQDLPFFDTVKVKVPNAHAIADAAVESEINLRVVDGKTITVAFDETTSLEDVDTLFKVFAGGKPVSFTAASLAPEVESAIPSGLTRDSPYLTHPIFNTYHTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFDNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVSVGTDAKGNINIAELRKAAETHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPENSQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLENHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIEKGKADINNNVLKGAPHPPSLLMGDAWTKPYSREYAAFPAPWLRVAKFWPTTGRVDNVYGDRNLICTLLPAAQVAEEQAAATA* 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4033 1041 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1041 - -
Amo16g4033 1041 MobiDBLite consensus disorder prediction 16 42 - -
Amo16g4033 1041 Pfam Glycine cleavage system P-protein 527 803 IPR020581 GO:0004375|GO:0006546
Amo16g4033 1041 Pfam Glycine cleavage system P-protein 85 510 IPR020581 GO:0004375|GO:0006546
Amo16g4033 1041 CDD GDC-P 134 510 IPR020581 GO:0004375|GO:0006546
Amo16g4033 1041 SUPERFAMILY PLP-dependent transferases 85 511 IPR015424 -
Amo16g4033 1041 SUPERFAMILY PLP-dependent transferases 531 1026 IPR015424 -
Amo16g4033 1041 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 76 1032 IPR003437 GO:0004375|GO:0006544
Amo16g4033 1041 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1041 IPR020581 GO:0004375|GO:0006546
Amo16g4033 1041 Gene3D - 165 425 IPR015421 GO:0003824
Amo16g4033 1041 Gene3D - 592 829 IPR015421 GO:0003824
Amo16g4033 1041 CDD GDC-P 553 948 IPR020581 GO:0004375|GO:0006546
Amo16g4033 1041 Gene3D Aspartate Aminotransferase, domain 1 154 506 IPR015422 GO:0003824
Amo16g4033 1041 TIGRFAM gcvP: glycine dehydrogenase 85 1025 IPR003437 GO:0004375|GO:0006544
Amo16g4033 1041 Gene3D Aspartate Aminotransferase, domain 1 840 979 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4033 Amo-Chr16 152550778 152558405 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4033 K00281 - gmx:100819714 1864.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4033 16 152550778 152558405 Amo16g4033 16 152550778 152558405 ECH
Amo16g4033 16 152550778 152558405 Amo20g2830 20 127885164 127891772 PCT
Amo20g2830 20 127885164 127891772 Amo16g4033 16 152550778 152558405 PCT