Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4021 ATGGAGCCGGTGACGATGGTGTTAATGGTACTATTAGTCATCCTGGCGGTTACGGCCGCCATGGATGACAATCAAACCCAAGTTCTAGAAGGCTGCCAAAGTTCTTGTGGAGACATTCAAATTCCATATCCATTTGGGATTGGAAAATCATCAAAAACCGGTAAGAATTGTTATTTATCGGAGCGATTTAACCTAGTTTGCACAAACTCAACCTTACATAGAGATAGAGGTTCAATTCCAATCATAGGCATAAACATCACCAAAGGTCAAGTTGACATGATGATTTTGATCTCCAAAAGTTGTTATGACAAAGATTCTGGTCCCACCATAACCATTGGGATCGAATCATGGCTAAGAACCACTTATTACACAATTTCTAGCATGGACAACAAGTTCATAAGTGTTGGTTGTGACACTTATGGCTACCTAAATAGTTTCTTCGATGGTGCAACATATTCAACCGGTTGTTTAACGAGATGCTATCGAGAATCGACGATTATCGTCGACGGAAAATGCTCCGGGATTGGGTGTTGTCAAGTGGATATTCCGGCCGGAATGAGGAACAACACGGTTCAAGCATTTAGCTTTGAGAATTTCAATAGATCCTTAGGGTTCAATAATTGTAGCTATGCTTTTGTTGCCAAAAATGGGAATTATACATTTTCTAAGGACCATTTGGAAAATTTACCTTATGAGAGGATGCCTGTGGTTTTTGATTGGAGTGTTGGAAATGAGAGATGTGAAGAGTCTTTGAAAAGTGGTAGCAATGTTTGTAAGGGTAATTCCAATTGTGAGGAATCAGAGGCTGGAAATGGTTATCTATGCAAATGCAAGGAAGGTTATCAAGGAAATCCATATCATCCCATTGGTTGCATAGACATTGACGAATGTAAGACAGGAAAGCACAAATGCATAAGTGAAAGTAATTGTCTAAATACAAATGGGTCTTACACATGTTTTTGTCCCAAGGGTCAAACTGGAAATGGCACAAAGGAACAAGGGGGATGTCAACACCAAAATTTACTTCCCAAGGTTCTCATCGGTGCAAGTGGAGGAACCATTGCTGTTGTTGTGGCAACTTCACTGTTTATTTTGACACATCAAAAAAGAAAGCACATCAAACTCAAACAACAATACTTCAAGCAAAATGGTGGCTTAATGTTGTTACAACACCTCTCTACAAGAGAAGAATCCTCACAAATTACTCAGATTTTCACATCAGAGGAACTAAAGAAGGCTACCAACAATTATGACGAGAACTTAATACTTGGAAGAGGAGGTTACGGTACAGTTTTCAAAGGTTTTCTTGACAATAATAGAATTGTGGCAATCAAGAAGTCTAAAATAGTTGATCAGAGCCAAACAGAGCAGTTCATCAATGAGGTGATTGTTCTATCTCAAATCAATCATAGAAACATAGTGAAACTGTTAGGTTGCTGCTTAGAAGAAGAGGTTCCTTTACTAGTTTATGAGTTTGTTAACAATGGTACCCTCTTTGATTTTATCCACAATCAAATTCAAAACAATGTGAATAATTTGTTAACTTGGAACACACGTCTAAGGATAGCAGCAGAGGCAGCTAGTGCTCTATCTTATCTACACTCAGCAGCATCTATACCCATTATCCATAGAGATGTGAAGAGTGCAAATATTCTCTTAGATGACAATTACACTGCAAAAGTTTCCGATTTCGGAGCTTCCAGATTGGTTCCACTAGATCAACAAGCGTTGGCCACCATGGTGCAAGGAACTATTGGATACTTGGATCCAGAATACATGCAAACGAGTCAACTAACTGAGAAAAGTGATGTGTATAGTTTTGGAGTCGTACTTGTAGAACTTCTAACAAGCGAAAAACCTCTTTCTTTTGATAGGACGGAAGAAAAGAGAAGTCTTGCTCTTTACTTTCTGTCCTATCTAAAAGAGGATCGCTTGTTTGAAGTCGTTCGAGTCGACCTTTTGAGTGAAGAAAACAAGCAAGAGATTGAAGAGGTTGCTTTTCTTGCGGCAAAATGTTTGAGACTTAATGGAGATGAGAGACCAAGTATGAAGGAAGTGGCAATGGAATTGGAGGGATTGCAGTTAATGCAGAAACACCGTTGGATCAATGGGAACAAAAATTTGGAAGAGACTTGTTACTTGCTTCCCAGTTCATCATCCAAAACATGTGAATATGGTGATAGTAGTTGCCATAAAAATGCTGGGTATGATAGCATCAGAGATCAAGTACTAATTTCTTTTGATGATGGAAGATGA 2256 0.3879 MEPVTMVLMVLLVILAVTAAMDDNQTQVLEGCQSSCGDIQIPYPFGIGKSSKTGKNCYLSERFNLVCTNSTLHRDRGSIPIIGINITKGQVDMMILISKSCYDKDSGPTITIGIESWLRTTYYTISSMDNKFISVGCDTYGYLNSFFDGATYSTGCLTRCYRESTIIVDGKCSGIGCCQVDIPAGMRNNTVQAFSFENFNRSLGFNNCSYAFVAKNGNYTFSKDHLENLPYERMPVVFDWSVGNERCEESLKSGSNVCKGNSNCEESEAGNGYLCKCKEGYQGNPYHPIGCIDIDECKTGKHKCISESNCLNTNGSYTCFCPKGQTGNGTKEQGGCQHQNLLPKVLIGASGGTIAVVVATSLFILTHQKRKHIKLKQQYFKQNGGLMLLQHLSTREESSQITQIFTSEELKKATNNYDENLILGRGGYGTVFKGFLDNNRIVAIKKSKIVDQSQTEQFINEVIVLSQINHRNIVKLLGCCLEEEVPLLVYEFVNNGTLFDFIHNQIQNNVNNLLTWNTRLRIAAEAASALSYLHSAASIPIIHRDVKSANILLDDNYTAKVSDFGASRLVPLDQQALATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTSEKPLSFDRTEEKRSLALYFLSYLKEDRLFEVVRVDLLSEENKQEIEEVAFLAAKCLRLNGDERPSMKEVAMELEGLQLMQKHRWINGNKNLEETCYLLPSSSSKTCEYGDSSCHKNAGYDSIRDQVLISFDDGR* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4021 751 SMART serkin_6 417 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g4021 751 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Amo16g4021 751 Gene3D Laminin 245 296 - -
Amo16g4021 751 ProSiteProfiles Protein kinase domain profile. 417 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g4021 751 SUPERFAMILY EGF/Laminin 293 328 - -
Amo16g4021 751 Pfam Calcium-binding EGF domain 293 330 IPR001881 GO:0005509
Amo16g4021 751 CDD EGF_CA 293 327 - -
Amo16g4021 751 Gene3D Phosphorylase Kinase; domain 1 385 492 - -
Amo16g4021 751 ProSiteProfiles EGF-like domain profile. 293 331 IPR000742 -
Amo16g4021 751 SUPERFAMILY Protein kinase-like (PK-like) 396 691 IPR011009 -
Amo16g4021 751 SMART egf_5 296 337 IPR000742 -
Amo16g4021 751 SMART egf_5 246 292 IPR000742 -
Amo16g4021 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Amo16g4021 751 Gene3D Laminin 297 334 - -
Amo16g4021 751 ProSiteProfiles EGF-like domain profile. 243 284 IPR000742 -
Amo16g4021 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 721 IPR045274 GO:0007166
Amo16g4021 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 12 721 - -
Amo16g4021 751 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 310 321 IPR000152 -
Amo16g4021 751 SMART egfca_6 293 337 IPR001881 GO:0005509
Amo16g4021 751 Gene3D Transferase(Phosphotransferase) domain 1 493 712 - -
Amo16g4021 751 ProSitePatterns Calcium-binding EGF-like domain signature. 293 319 IPR018097 GO:0005509
Amo16g4021 751 CDD STKc_IRAK 423 693 - -
Amo16g4021 751 Pfam Protein kinase domain 419 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g4021 751 Coils Coil 651 671 - -
Amo16g4021 751 Pfam Wall-associated receptor kinase galacturonan-binding 32 91 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4021 Amo-Chr16 152381972 152387221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4021 1 751 Receptor kinase-like Gene Family AT1G21230 45.953 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo16g4021 Pkinase 6.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4021 - - adu:107495457 1433.7