Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4017 ATGGTGTCTATGGAATTAGAATGGTGGTTATTTCCATTTATTCCAAGTGTACCTATGGTTTCATCAATATTATTCACCATGCTAGTAGGGTTTGTATGGTACCTTTATGGGCCCTATTGGAGGCTAAGAAGAGTTCCCGGCCCACCATCTCTTCCTCTTGTAGGACACCTTCCATTGCTTGCTAAGTATGGCCCTGATGTCTTCTCTGTCCTTGCAAAGCAATATGGCCCAATTTACAGATTTCATATGGGAAGACAGCCACTAATAATAATAGCAGAAGCAGAACTTTGTACTGAAGTTGGAATAAGAAAGTTCAAACAAATTTCAAATAGAAGCATTCCATCTCCTATTTCTGCTTCCCCACTCCACCAAAAAGGTCTCTTCTTCACCAGGGGTCAACGTTGGTCAACCATGAGAAACACCATAATCTCAATGTACCAACCATCACACTTGGCCAGCTTAGTGCCAAGAATGCAATCATTCATAGAATCAGCAACACAAAATCTAGATCACATCACAAATACTAATGAAGACATAACATTCTCCAATCTCTCACTTAGGCTTGCAACCGATGTAATTGGTGATGCTGCATTTGGTGTCAACTTTGGACTCTCAAATCCCAATTATTCATCTAATTGTGATTTATCAATCAAGAACAATAATAATGTTAATGTTAACAAGGAAGTTTCTGATTTCATTAATCAACACATTTATTCCACTACACAACTGAAAATGGACCTATCCGGTTCATTTTCTATCATACTAGGATTAATTGTACCATTGCTTCAAGAACCGTTTCGGTGGATCTTGAAGCTGATTCCGGGTACCATGGATCAGAAAATAGAGAATACCAACAGGAAATTGAGCCGCCGACTCGACGAGATTGTGAAAAGGAGGATGGAAGAAAGTAACAGGAGTTGCAAGAATTTCTTGTCACTTATTTTGAATGCAAGGGAATCAAGAAATGTGTCTGAGGATGTGTTCACACATGATTATATTAGTGCTGTTACTTATGAACACTTGCTTGCAGGGTCAGCTACCACTTCTTTTACACTGTCCTCTGTTGTTTATTTGGTTGCTGGCCATCCTGAAGTTGAGAGCAAGTTGATTCAAGAGATCGATGACTTCGGTCCGCCTGATCGGATGCCGACTGCCCAAGATCTTCAAGATAGTTTTCCTTATCTTCATCAGGTTATTCAAGAGGCCATGAGGATTTACACTGTCTCCCCATTAGTTGCAAGAGAAACATCAACTGAAGTAGAGATAGGAGGTTATCTCCTTCCAAAGGGAACATGGGTGTGGCTAGCACTTGGAGTTCTAGCAAAAGACCCAAAACAATTTCCAGAGCCAGAGAAGTTCAAACCAGAGAGATTTGACCCTAAATGTGATGAGATGAAACAAAGGCACCCTTATGCATTTATACCATTTGGAATTGGTCCTCGTGCCTGTATTGGCAAAAAATTTTCCCTACAAGAGATCAAGCTTTCTCTAATTCATTTGTATAGGAAATATTTGTTTCGCCATTCACCTAACATGGAAAAGCCTTTAGAACTAGAATATGGTATAGTTCTCAATTTCAAGCATGGTGTCAAGCTTAGAGTCATAAACAGAACAAATTAA 1620 0.3957 MVSMELEWWLFPFIPSVPMVSSILFTMLVGFVWYLYGPYWRLRRVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIAEAELCTEVGIRKFKQISNRSIPSPISASPLHQKGLFFTRGQRWSTMRNTIISMYQPSHLASLVPRMQSFIESATQNLDHITNTNEDITFSNLSLRLATDVIGDAAFGVNFGLSNPNYSSNCDLSIKNNNNVNVNKEVSDFINQHIYSTTQLKMDLSGSFSIILGLIVPLLQEPFRWILKLIPGTMDQKIENTNRKLSRRLDEIVKRRMEESNRSCKNFLSLILNARESRNVSEDVFTHDYISAVTYEHLLAGSATTSFTLSSVVYLVAGHPEVESKLIQEIDDFGPPDRMPTAQDLQDSFPYLHQVIQEAMRIYTVSPLVARETSTEVEIGGYLLPKGTWVWLALGVLAKDPKQFPEPEKFKPERFDPKCDEMKQRHPYAFIPFGIGPRACIGKKFSLQEIKLSLIHLYRKYLFRHSPNMEKPLELEYGIVLNFKHGVKLRVINRTN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4017 539 Gene3D Cytochrome P450 35 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 Pfam Cytochrome P450 46 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PANTHER THROMBOXANE-A SYNTHASE 20 538 - -
Amo16g4017 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Amo16g4017 539 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g4017 539 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 538 - -
Amo16g4017 539 SUPERFAMILY Cytochrome P450 39 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4017 Amo-Chr16 152316180 152322677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4017 83 537 Cytochrome P450 AT2G26170 70.110 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4017 K20771 - gmx:100805689 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4017 16 152316180 152322677 Amo08g0902 08 15661370 15665669 PCT
Amo16g4017 16 152316180 152322677 Amo17g2911 17 131274236 131277814 PCT
Amo08g0902 08 15661370 15665669 Amo16g4017 16 152316180 152322677 PCT
Amo17g2911 17 131274236 131277814 Amo16g4017 16 152316180 152322677 PCT