Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4008 GCAACAATGAGTCTTCGTAAGGGCGCTAAGGTTTGGGTCCAGGACAGGGTTGATGCTTGGATACCTGCCGAAGTTGTTGACTCCGGAGGCGGCGGCGGTGGCGGCGGAGTCAACAATAGTCGTATTCAGCTCGTGACCGACTCCGGCAAGAAGGTTTTTTCTACCCCTGATAAGCTGTTCCCGCGGGATGCGGATGAAGAAGAGCATGGTGGAGTTGAAGACATGACTAAGCTGGCTTACTTGAATGAGCCAGGAGTGTTGTACAATCTTCGGAGGAGATATGCGCTCAATGATATCTATACTTATACAGGAAGCATTTTAATAGCTGTTAATCCCTTCACAAAGCTTCCTCATTTGTATGAAATCCATATGATGGAGCAGTATAAGGGAGCTCCATTCGGTGAGCTTAGCCCACATGTTTTTGCTGTTGCAGATTCTTCTTATAGAGCAATGATGAGTGAAGGTAAAAGTCAATCTATCTTGGTAAGCGGTGAAAGTGGTGCTGGCAAAACTGAGACAACAAAATTAATCATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGACGATAGAACAGTTGAACAACAAGTTCTGGAATCAAATCCACTTTTAGAGGCATTTGGTAATGCAAGGACAGTCAGAAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAGTGGTAGAATATCTGGTGCTGCAATTAGAACATACTTATTGGAAAGATCACGAGTAGTGCAGATAACGAATCCAGAAAGAAATTATCACTGTTTTTATCAGTTGTGTGCATCTGAAATGGATGCAGAAAAGTATAAGTTGGGACATCCAAGCCACTTCCACTATTTAAACCAAAGTAAAATCTATGAACTTGATGGTGTAAGCAATGCTGAAGAATATGTGAAGACGAGGAGGTCAATGGATATTGTTGGCATAAGTCATGAGGACCAGGAAGCCATATTTCGTGTCTTAGCTGCAATTTTACATTTGGGGAATATTGAATTTTCTCCTGGAAAAGAGCATGACTCGTCAGTAGTAAAGGATGAGAAATCAAGATTCCATATGCAGATGGCTGCTGAACTCTTCATATGTGATGTAGAGCTACTACTAGCAACATTATGTACTCGGTCAATACAAACTCGAGAGGGAAATATAATTAAAGCTCTTGATTGTAATGCTGCTGTTGCTGGACGGGATGCTTTGGCAAAAACGGTTTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTTGGTCAGGATACAAATTCTCAGATTCAAATTGGAGTTCTCGATATCTATGGCTTTGAGTGCTTCAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAAGAGTATGGTAGAGAAGAAATAAACTGGAGTTACATTGAATTCGTGGACAACCAAGATGTGTTGGATCTAATTGAAAAGAAACCCATTGGTATCATTGCTCTATTGGATGAAGCCTGCATGTTCCCAAAATCTACGTATGAAACATTCTCAACCAAGTTGTTTAACCATTTCCAGTCTCATCCGAGATTGGAAAAGGAGAAGTTTTCACAAACTGATTTCAGTATTTCTCATTATGCTGGAAAGGTTACATATCACACAGATTCCTTCTTAGACAAAAATCGTGATTATGTTGTAGTAGAACACTGTAATCTATTATCTTCTTCGAAATGCCCCTTTGTGTCTGGTCTTTTTCCTTTGCTACCAGAGGAATCTTCAAGATCATCTTACAAGTTTTCATCTGTGGCATCCAGATTTAAGCAACAACTCCAAGCTCTTATGGAGACCCTTAAATCAACAGAGCCTCATTACATACGATGCGTGAAGCCAAATTCTTTGAACCGACCACAAAAGTTTGAGAATTCCAGTGTCATACACCAATTGCGATGTGGGGGTGTCCTTGAGGCTGTTCGTATAAGCCTAGCTGGTTACCCCACCCGAAGGACTTATTCAGAGTTTGTGGATCGCTTTGGCTTAATAGGCCCTGAATTAATGGACGGGAGTTATGATGATAAAGTTGCAACTGAGAGAATTCTGAAGAAGCTCAAGCTTGATAACTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGAGCTGGTCAAATTGGTATTTTAGACTCCAGACGAGCTGAGGTTCTGGACAATGCTGCAAAATGTATTCAGCGGCGACTGAGGACATTTATTTTACACAGGGATTTCATCTCACTCAGAGCTGCTGCAATTTCTATTCAGTCATGCTGCAGGGGGTGCATTGCACGAAAGATTTACGTTGCTAAAAGGGAGACCGCTGCAGCTATCTCTATTCAGAAATACATCCGTATGTGTCTAAAGAGGTGTGCTTACTTAGAACTATATTCATCTACTGTCATCATTCAGTCACATGTCCGTGGTTTTGCAACTCGCAAAAGATTCTTGCATGGAAAGGAGCATAGAGCTGCTACTGTTATTCAGGCATATTGGAGGATGGCCAAGGTTAGGTCAACTTTCCGACAACGTCAAGCTTCAATTGTGGCAATACAATGCCTTTGGCGGCGTAAACAAGCTAAAAGAGAGCTTCGGAGACTTAAGCAAGAGGCTAATGAGGCTGGTGCTCTCCGTTTAGCTAAGAGTAAACTTGAGAAGCAATTGGACGAGCTTACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGGTTCCAATGAAGAGTCTAAGCAAATGGAGATTTCCAAACTTCAAAAGATGTTAGAAGCCTTGAATCTTGAATTAGATGCAGCTAAATTGGCAACAATTAACGAGTGCAATAAGAATGCTGTTCTGCAAAATCAGTTGGAATTGTCAATGAAGGAAAAATCTGCTTTAGAAAAAGAGTTGGTTGTAATGGAGGAAGTACGGAAGGAAAATGCTATCCTAAAGGATTCTTTGAGTGCCTTCGAAAAGAAGTGCACAAATTTGGAACTTGAACTCATGGATGCTCAAAAAGGCCGTATAGAAATGGTTGAGAAACTGAGAGAATTTGAACAGAAGTGTTCTCAACTTGAGCAAAGTGTTAAGAGCCTTGAGGGGAAGGTATTGAATTTAGAGGAAGAAAATCACGTGCTTCGGCAGAAAGCCTTAAGTGCTGCTCCTAAGAGTAACCGTTCAGGTCTTGCAAAGTCATTGTCAGAGAAATATTCAAGCGTAATTGCTTCCCGCACTGAGAGAAAGCCCCTATTTGAGACACCCACACCCACAAAACTTGCTCCTTTTACATCAGGCTTGACAGACCCTCGTCGTCCTAAGTTAACAGCAGAGAGGCACCAGGATAACTATGAATTTCTTTCTAGGTGTATCAAAGAAAATTTGGGATTTAAAAACGGTAAACCTCTGGCAGCTCGTATCATATACAAATGTCTTCTTCAATGGCGTGCCTTTGAATCTGAGCGCACAGCTATTTTTGATTACATAATTGAAGGCATAAACGATGTTCTAAAGGTTAAGGATGATGCCTCTCTATTGCCATATTGGCTTTCAAATACATCTGCCCTGCTGTGCCTTTTACAGAGGAACATACGTTCAAATGGCTTTTTAACTCCCACTGCTCATCGTCATACGGGATCTTCTGGTTTCAGCAGCCGATTAGGCCATGGACCAAAATCTCCAATGAAGCTTATTGGATATGATGATGGTTTTTCACATGTGGAGGCAAGATATCCAGCTATACTTTTTAAGCAACAGCTCACTGCTTGTGTAGAGAAAATTTTTGGTCTTATACGAGATAATTTAAAAAAGGAACTCTCCCCTCTTCTGGGGCAATGTATTCAGGCTCCCAAAGCAGGACGATCCCATGGTGGAAAGTCAACCAGATCTCCTGGTGCACCTCCTCAACAATCATCTGGTGGTCAATGGGACAATATTGTCAAATTTTTGGACACACTCATGAGCCAACTTCGTGGAAACCATGTGCCTTCCTTCTTTATCCGCAAGCTAGTTACCCAGGTCTTTTCTTTCATCAATATAACCCTTTTTAACAGTCTTCTCTTGCGGCGTGAATGTTGCACATTCTCAAATGGTGAGTATGTGAAGTCTGGTCTAGCAGAATTGGAGAAGTGGATAGGCAATGCAACAGAGGAGTATGCAGGAACATCTTGGCATGAGCTTAATTATATAAGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAGATTTGCCAAGATCTTTGCCCGGCACTGACGGTGAGGCAGATCTATCGAATCAGTACTATGTACTGGGACGACAAGTATGGAACCCAGAGCGTATCCAATGAGGTAGTCAGTGAAATGAGGGAAATTGTTAGTAAGGACAATCAAAACTTGACCTCAAATTCTTTTCTGTTGGATGACGATCTGAGTATTCCTTTCTCGGCCGAAGACATAGATATGGCAATCCCTGCTATAGATCCGGATGATATTGAGCTTCCACCATTCTTGTCTGAACATCCCTGTGCCGAATTTCTTACTTCGCTTCAGAAGTCTACTACAGTTTCATGA 4596 0.4136 ATMSLRKGAKVWVQDRVDAWIPAEVVDSGGGGGGGGVNNSRIQLVTDSGKKVFSTPDKLFPRDADEEEHGGVEDMTKLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYEIHMMEQYKGAPFGELSPHVFAVADSSYRAMMSEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSSGRISGAAIRTYLLERSRVVQITNPERNYHCFYQLCASEMDAEKYKLGHPSHFHYLNQSKIYELDGVSNAEEYVKTRRSMDIVGISHEDQEAIFRVLAAILHLGNIEFSPGKEHDSSVVKDEKSRFHMQMAAELFICDVELLLATLCTRSIQTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDTNSQIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGREEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTYETFSTKLFNHFQSHPRLEKEKFSQTDFSISHYAGKVTYHTDSFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVASRFKQQLQALMETLKSTEPHYIRCVKPNSLNRPQKFENSSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIGPELMDGSYDDKVATERILKKLKLDNFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFILHRDFISLRAAAISIQSCCRGCIARKIYVAKRETAAAISIQKYIRMCLKRCAYLELYSSTVIIQSHVRGFATRKRFLHGKEHRAATVIQAYWRMAKVRSTFRQRQASIVAIQCLWRRKQAKRELRRLKQEANEAGALRLAKSKLEKQLDELTWRLHLEKKIRGSNEESKQMEISKLQKMLEALNLELDAAKLATINECNKNAVLQNQLELSMKEKSALEKELVVMEEVRKENAILKDSLSAFEKKCTNLELELMDAQKGRIEMVEKLREFEQKCSQLEQSVKSLEGKVLNLEEENHVLRQKALSAAPKSNRSGLAKSLSEKYSSVIASRTERKPLFETPTPTKLAPFTSGLTDPRRPKLTAERHQDNYEFLSRCIKENLGFKNGKPLAARIIYKCLLQWRAFESERTAIFDYIIEGINDVLKVKDDASLLPYWLSNTSALLCLLQRNIRSNGFLTPTAHRHTGSSGFSSRLGHGPKSPMKLIGYDDGFSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGQCIQAPKAGRSHGGKSTRSPGAPPQQSSGGQWDNIVKFLDTLMSQLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEICQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDPDDIELPPFLSEHPCAEFLTSLQKSTTVS* 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4008 1531 ProSiteProfiles IQ motif profile. 839 868 IPR000048 GO:0005515
Amo16g4008 1531 CDD MYSc_Myo11 84 728 IPR036018 -
Amo16g4008 1531 PRINTS Myosin heavy chain signature 157 182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 PRINTS Myosin heavy chain signature 204 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 PRINTS Myosin heavy chain signature 489 517 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 PRINTS Myosin heavy chain signature 100 119 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 PRINTS Myosin heavy chain signature 436 464 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 790 IPR027417 -
Amo16g4008 1531 Gene3D Myosin VI head, motor domain, U50 subdomain 319 609 - -
Amo16g4008 1531 Pfam DIL domain 1345 1448 IPR002710 -
Amo16g4008 1531 Pfam IQ calmodulin-binding motif 792 811 IPR000048 GO:0005515
Amo16g4008 1531 Pfam IQ calmodulin-binding motif 817 834 IPR000048 GO:0005515
Amo16g4008 1531 Pfam IQ calmodulin-binding motif 767 786 IPR000048 GO:0005515
Amo16g4008 1531 Pfam IQ calmodulin-binding motif 840 860 IPR000048 GO:0005515
Amo16g4008 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 839 894 IPR027417 -
Amo16g4008 1531 Pfam Myosin head (motor domain) 72 728 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 ProSiteProfiles IQ motif profile. 862 891 IPR000048 GO:0005515
Amo16g4008 1531 ProSiteProfiles IQ motif profile. 814 843 IPR000048 GO:0005515
Amo16g4008 1531 Coils Coil 983 1059 - -
Amo16g4008 1531 SMART iq_5 813 835 IPR000048 GO:0005515
Amo16g4008 1531 SMART iq_5 790 812 IPR000048 GO:0005515
Amo16g4008 1531 SMART iq_5 765 787 IPR000048 GO:0005515
Amo16g4008 1531 SMART iq_5 742 764 IPR000048 GO:0005515
Amo16g4008 1531 SMART iq_5 838 860 IPR000048 GO:0005515
Amo16g4008 1531 SMART iq_5 861 883 IPR000048 GO:0005515
Amo16g4008 1531 ProSiteProfiles Dilute domain profile. 1169 1469 IPR002710 -
Amo16g4008 1531 Coils Coil 868 905 - -
Amo16g4008 1531 CDD MyosinXI_CBD 1120 1492 IPR037975 GO:0007015
Amo16g4008 1531 Gene3D - 446 631 - -
Amo16g4008 1531 PANTHER PROTEIN OPAQUE1-LIKE 5 1524 - -
Amo16g4008 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 836 IPR027417 -
Amo16g4008 1531 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 6 64 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 Coils Coil 924 951 - -
Amo16g4008 1531 ProSiteProfiles IQ motif profile. 766 795 IPR000048 GO:0005515
Amo16g4008 1531 MobiDBLite consensus disorder prediction 1292 1316 - -
Amo16g4008 1531 Coils Coil 959 979 - -
Amo16g4008 1531 SMART MYSc_2a 64 741 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 ProSiteProfiles Myosin motor domain profile. 70 740 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g4008 1531 Gene3D - 675 741 - -
Amo16g4008 1531 Gene3D - 260 317 - -
Amo16g4008 1531 PANTHER MYOSIN 5 1524 - -
Amo16g4008 1531 Gene3D - 742 791 - -
Amo16g4008 1531 Gene3D - 841 890 - -
Amo16g4008 1531 Gene3D - 792 840 - -
Amo16g4008 1531 SMART DIL_2 1344 1451 IPR002710 -
Amo16g4008 1531 Gene3D Kinesin motor domain 73 670 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4008 Amo-Chr16 152179655 152197594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4008 3 1522 Myosins gene family AT4G33200 72.518 0.0 2265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4008 K10357 - gmx:100790815 2609.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4008 16 152179655 152197594 Amo16g4008 16 152179655 152197594 ECH