Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3978 ATGGGTTCTCTTATGGCAGGATGGGACTCTAAATCAGCAACACTTAAGAGGAACCGTTCCCTTACCAAAGATGAAATTGATGCTTATTGGAGATCAAAGAAGAAGATAGAGGAAGAACATCTTAGAGCTATTTCAAATTTAGCACAAGTTGTTCAGACAAGTACAACATCAATTGAAGTTGAGAAGAAGCTTCGAAGGGCAATTACCATGCCCTTAGGCCGTGGAAATGAGTCATTACATTTGAATATTGACTCAAATTTGGAGGAGCTTATCAAGAAAAATGGATGGTGGACCAAGAGTAGCTGGGCATTTCTGAATGAGCCTCCAGTTACTGAATCTTCATCCAACAAGTATGTGTCTCAATTTCATGTTGCAAACATGGGAACTACTCATGGAGATGGAATCAGTGCTTGA 414 0.3986 MGSLMAGWDSKSATLKRNRSLTKDEIDAYWRSKKKIEEEHLRAISNLAQVVQTSTTSIEVEKKLRRAITMPLGRGNESLHLNIDSNLEELIKKNGWWTKSSWAFLNEPPVTESSSNKYVSQFHVANMGTTHGDGISA* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3978 137 PANTHER - 1 130 - -
Amo16g3978 137 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3978 Amo-Chr16 151752229 151754134 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3978 - - gmx:100527212 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3978 16 151752229 151754134 Amo16g3978 16 151752229 151754134 ECH
Amo16g3978 16 151752229 151754134 Amo08g0081 08 1774923 1775894 PCT
Amo08g0081 08 1774923 1775894 Amo16g3978 16 151752229 151754134 PCT