Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3975 ATGATTGCTGTTGATGAGTTAGTTCATAATAAAGGTGCTAAAGTTTTGGAGAATCCAAATCCTTGTAAAGATCTTAAGGCTATGACATCACATAGGATACTTTCAAGATGTGAAAAAATTCGAAATGCATTTGAGTTATACTTGACTCAAATTCAAAGTGCTGTTCCATTGTCCTTGGCTGCTGAGATATCTGAAATACTCCATGATCTTAAGGATACAGAATTTTCCCTAGGAATTGAAGAAGTTGAAGCTAGGAAAGCAATTCTAGCATTGTATGAGAAGGACTTAAATGATTCAGCTTCTTCTATGGAGAATGCAGAACTTGAAGCCATTCAAATTGCAACTTCAAGGTTGAAAATAAACTCTACATTCTCTCTCATAGTAGAGAAAGCATCACTTAGGAAGCAACTTGATCAAGTTATTAATAATGACACAAACCAAAAGGAGAAGCAACTTCTACAATACCTTTTGTATTTATTGATGAGATATGGCAAATTCATTCATCAAATTGGAAGCAACTCTTTGGATCATGACTTAGTTGTGGATAAAGAACATAGTCATCAAGTTATGGAATCAATTGACAATGTAGTTAGAGACTTTGAAGTACTTAGTACTTGA 618 0.3382 MIAVDELVHNKGAKVLENPNPCKDLKAMTSHRILSRCEKIRNAFELYLTQIQSAVPLSLAAEISEILHDLKDTEFSLGIEEVEARKAILALYEKDLNDSASSMENAELEAIQIATSRLKINSTFSLIVEKASLRKQLDQVINNDTNQKEKQLLQYLLYLLMRYGKFIHQIGSNSLDHDLVVDKEHSHQVMESIDNVVRDFEVLST* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3975 205 Coils Coil 89 109 - -
Amo16g3975 205 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 26 172 - -
Amo16g3975 205 PANTHER U BOX DOMAIN-CONTAINING 26 172 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3975 27 168 U-box Gene Family AT1G27910 30.986 3.67e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3975 - - aip:107648587 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3975 16 151711179 151713556 Amo16g3975 16 151711179 151713556 ECH