Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3945 ATGGCTTCCGACGGTGCTACATCGGCGGCGACTAGCCGGAGGAAGCCGTCGTGGCGTGAGAGGGAGAACAATCGGAGGAGAGAGAGGAGGAGGAGAGCTATAGCGGCCAAGATCTACGCTGGTTTGCGAGCTCAGGGGAACTATAACTTGCCGAAACACTGTGATAACAACGAGGTGCTTAAAGCTCTCTGTGCTGAAGCTGGTTGGGCCGTTGAAGAAGACGGAACCACGTATCGCAAGGGCTGCAAGCCACCGCTGGCCAATAATGGTGCAGGCACTTCCTCCAGAAACACACCTTTCTCTTCACAGAATCCTAGTCCTCTGTCTTCATCTTTTCCAAGTCCAATTCCTTCCTACCAAGTCAGTCCTACTTCCTCCTCTTTCCCGAGCCCTTTCCGTTTGGACGGAGAGAACACATCGAACCTCATTCCATACCTTCGTAATGCTATTCCTGCATCCCTCCCTCCTCTAAGGATATCAAATAGTGCCCCTGTGACACCACCACTCTCATCGCCAACTTCAAGAAATCCTAAACCGATTCCCACATGGGAAGCTATTGCAAAAGAATCCATGTCGTCTTTTAGTTATCCTTTCTTTGCAGCTTCAGCCCCCGCTAGCCCCACACACAGACAATTTTACACCCCGGCAACTATCCCGGAATGTGACGAGTCGGATACTTCCTCCACCATTGAGTCTGGCCAGTGGCTGAAATTCCAAGCATTTGGACCCTCTGCATCGGCGATGCCAACATCTCCAACCTTCAATCTTGTTAACCCTGTAGCGGCTCAGCACTATGTGCCTGATAAAGCAATCCAAGGGCTGAGGATAAGTTCCGCAGAAGAGTTTGGGGTACAGCCACAGGTAAAGCCTTGGGTCGGAGAAAAAATTCATGAGGTAGGATTGGATGATTTGGAGCTTACACTTGGAAGCGGAAAAGCACGGAGCTAA 948 0.5084 MASDGATSAATSRRKPSWRERENNRRRERRRRAIAAKIYAGLRAQGNYNLPKHCDNNEVLKALCAEAGWAVEEDGTTYRKGCKPPLANNGAGTSSRNTPFSSQNPSPLSSSFPSPIPSYQVSPTSSSFPSPFRLDGENTSNLIPYLRNAIPASLPPLRISNSAPVTPPLSSPTSRNPKPIPTWEAIAKESMSSFSYPFFAASAPASPTHRQFYTPATIPECDESDTSSTIESGQWLKFQAFGPSASAMPTSPTFNLVNPVAAQHYVPDKAIQGLRISSAEEFGVQPQVKPWVGEKIHEVGLDDLELTLGSGKARS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3945 315 MobiDBLite consensus disorder prediction 14 29 - -
Amo16g3945 315 MobiDBLite consensus disorder prediction 1 31 - -
Amo16g3945 315 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 314 - -
Amo16g3945 315 MobiDBLite consensus disorder prediction 88 133 - -
Amo16g3945 315 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 314 IPR033264 GO:0003700|GO:0006351|GO:0009742
Amo16g3945 315 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 141 IPR008540 -
Amo16g3945 315 MobiDBLite consensus disorder prediction 76 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3945 Amo-Chr16 151366775 151369657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3945 13 314 BZR Transcription Factor Family AT1G75080 70.347 3.58e-127 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Amo16g3945 BES1_N 5.4e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3945 K14503 - gmx:100785743 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3945 16 151366775 151369657 Amo16g3945 16 151366775 151369657 ECH