Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3932 ATGCAAACCTTACTAGCATCATCAACCCCTAAATTTCAAGGACCAGATTTGTCCTTAAACATAAGCCCTCCATGTGTTGGTGTTTCAGATTCCGAAAACAACAACCTCAACAACAACAACATGAACATGAACATGAACATCCATGAAAACAACAACAACAACCTCAACCTTCTTCATCATGAACCTACATTGACCTTAGATTTGAATAACTACCATTATCATCATCAAGGACTTTCTAGAAGCTTCAATAATCACCACCATTTCCAACCTGAAATCTATGGTCGCAAGTTCAAGAGAAGCTCCAGGGTCATTAATGGAGTCAAGAGGAGCGTGAGAGCACCTAGGATGAGATGGACAACAACCCTCCATGCCCATTTTGCTCATGCTGTTCAACTCCTTGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTTTAGAGTTAATGAATGTTAAGGATCTAACTCTAGCACACGTCAAAAGTCAGTTACAGTGGGCAATGTATAGAAACAAGGACTAA 516 0.407 MQTLLASSTPKFQGPDLSLNISPPCVGVSDSENNNLNNNNMNMNMNIHENNNNNLNLLHHEPTLTLDLNNYHYHHQGLSRSFNNHHHFQPEIYGRKFKRSSRVINGVKRSVRAPRMRWTTTLHAHFAHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSQLQWAMYRNKD* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3932 171 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 9 168 IPR044847 GO:0000976|GO:0006355|GO:0010158
Amo16g3932 171 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 114 170 IPR006447 GO:0003677
Amo16g3932 171 Coils Coil 33 53 - -
Amo16g3932 171 Gene3D - 113 171 - -
Amo16g3932 171 SUPERFAMILY Homeodomain-like 111 168 IPR009057 -
Amo16g3932 171 PANTHER TRANSCRIPTION FACTOR KAN4-RELATED 9 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3932 Amo-Chr16 151126661 151127563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3932 78 168 G2-like Transcription Factor Family AT5G42630 76.042 3.19e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo16g3932 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3932 - - adu:107495895 256.529