Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3903 ATGGCAGCATTATTATTGGTGCTGCTGCTGAATTTGAATCTGGACATGGGAATTTACCATGATGATCCGGTTCCATGTCCCGTGCGTCTCTACTGTTCAGAAGACAAAACCAATATTCTTGAGCTGCCTGCCTTTCCATCCTCAGTAAAACTCCCCGTCACAAGCATTAGCTACACATCAAACACTTTACAAGTATATGATCCCAAACACTGTTTTCCACAACTCTTTCTCACACTCAATTATTCATCATTTTATCCTTTCCAATCCATTAAACAATCACTTGATTTCGATAGTTTTTATGATCCTCTACACCCAACAAACTGTACTTTCTTTGATTGTTCTTCAAGCGTGCCACCAAACATCCTCAGCGGCTACTACGAGGAACAAGATCTGTTATCTTGCCCGATTCTTATTGCTTTAGATGACGACAACATCATCGAATCCAACCTTGTATTGTGCACAAAATTGACTCGTCATGTCTTGCCAATTTCCGTATGTAAGATACAGTGGAATTGGGAACCATTATACTTGGTATGGTCGACAGAAACTTTCAAGAGTGGATGCTTTGTTGCTTGCAACGTATCCAACAATGGTACTGAACACCATGAATCCGTTCTTTTACCCCTTACAGGTGCAACTCTCCTTGTGCTAATAGTGGGTGTCATGTATCATATATATTGCTATTATAGAAACAAAGGAGAAGATCAAGAAAGAGTTGAAACTTTTTTGAAGGACTACAAAGCATTAAACCCAACAAGATTCTCTTATACTGATATCAAGAGAATTACTAAGCAGTTCAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTAACTAATCAAATTCTGGTTGCCGTCAAGATTCTCAATAAAGCAGATGGAGATGGGACAGAATTCATAAATGAAGTGGGAACAATGGCCAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTGGTTTATCACTTCTTCCCCAATGGTAATCTCCAGAGCTTCATTGCTCTGTCAAGTGACAAGGAAACCTTCTTTGGATGGAACAAGATGCATCAGATTGCTGTGGGCATAGCCAAAGGGATTGAATACCTTCACCAAGGCTGTGACCAAAGAATTTTGCATTTCGACATTAATCCTCGCAATGTCTTGTTAGATCAAAGTTTCACTCCTAAAATTTCAGACTTTGGTTTAGCTAAGTTATGCTCGAAGAATCGAAGCACTGTGTCCATGACAGCAGCAAGGGGAACCTTAGGATACATGGCGCCTGAATTATGGGATGCTATTGCTTGA 1329 0.4086 MAALLLVLLLNLNLDMGIYHDDPVPCPVRLYCSEDKTNILELPAFPSSVKLPVTSISYTSNTLQVYDPKHCFPQLFLTLNYSSFYPFQSIKQSLDFDSFYDPLHPTNCTFFDCSSSVPPNILSGYYEEQDLLSCPILIALDDDNIIESNLVLCTKLTRHVLPISVCKIQWNWEPLYLVWSTETFKSGCFVACNVSNNGTEHHESVLLPLTGATLLVLIVGVMYHIYCYYRNKGEDQERVETFLKDYKALNPTRFSYTDIKRITKQFKDKLGEGAHGAVYKGKLTNQILVAVKILNKADGDGTEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQSFIALSSDKETFFGWNKMHQIAVGIAKGIEYLHQGCDQRILHFDINPRNVLLDQSFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPELWDAIA* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3903 442 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 438 IPR045874 GO:0004672
Amo16g3903 442 Gene3D Transferase(Phosphotransferase) domain 1 339 440 - -
Amo16g3903 442 Gene3D Phosphorylase Kinase; domain 1 237 338 - -
Amo16g3903 442 Pfam Protein tyrosine and serine/threonine kinase 266 438 IPR001245 GO:0004672|GO:0006468
Amo16g3903 442 ProSiteProfiles Protein kinase domain profile. 264 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3903 442 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Amo16g3903 442 SUPERFAMILY Protein kinase-like (PK-like) 244 439 IPR011009 -
Amo16g3903 442 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3903 Amo-Chr16 150822241 150823698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3903 230 441 Receptor kinase-like Gene Family AT1G66910 46.479 6.12e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo16g3903 PK_Tyr_Ser-Thr 7.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3903 - - ahf:112805998 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3903 16 150822241 150823698 Amo16g3903 16 150822241 150823698 ECH