Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3898 ATGTTGGGTAAAGCCAAGGGTAATGGTCAAGATTTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATGTAGTAAGGTGGATTGGATTTTGTGTTGAGGGTTCAAAACGCGCTCTTGTATACGAATTTATGCCGAATGGTTCTTTAGATAAGTTTATCTTCTCCAAAGTGGATAGTATATCATCGACATACCATAAACTTTTTGAAATATCTCTTGGTGTGGCTCGTGGTATAGCTTATCTGCATGAAGGTTGCGACATGCAAATTTTGCATTTTGATATCAAGCCTCATAACATTCTTCTTGATGAGAACTTCATTCCTAAGGTCTCAGACTTTGGTCTTGCAAAGCTTAATCCTCTTGATAACAGTATTGTATCTTTGACAGCAGCAAGAGGAACTATTGGTTACATGGCTCCAGAATTTGATGAAATAAGATTGGAAATTTTGATGCATGAAGAAACAAGCGAACTAACAAAAAAGATTGATCGTCCTTCAATGAATAAAGTAGTGGAAATGTTAGAAGGAGGGGATGCTGCAAGTATTGAAATGCCTCCAAAGCCTTCGCATTATCCAAATGATATTATTCAGAGAGATTCTGAGATTGACTTAGGAGAAACTACTTCAAATAATTCTTCTGGCTCTTCAAGTTTTGAGGAGGAAATTGTAACTAACCCTCTGTTGAAGTTTTCTGGATGA 705 0.3688 MLGKAKGNGQDFISEVATIGRIHHANVVRWIGFCVEGSKRALVYEFMPNGSLDKFIFSKVDSISSTYHKLFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPLDNSIVSLTAARGTIGYMAPEFDEIRLEILMHEETSELTKKIDRPSMNKVVEMLEGGDAASIEMPPKPSHYPNDIIQRDSEIDLGETTSNNSSGSSSFEEEIVTNPLLKFSG* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3898 234 MobiDBLite consensus disorder prediction 204 224 - -
Amo16g3898 234 PANTHER RUST RESISTANCE KINASE LR10-RELATED 163 206 IPR045874 GO:0004672
Amo16g3898 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Amo16g3898 234 Gene3D Transferase(Phosphotransferase) domain 1 2 168 - -
Amo16g3898 234 SUPERFAMILY Protein kinase-like (PK-like) 10 145 IPR011009 -
Amo16g3898 234 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 144 - -
Amo16g3898 234 MobiDBLite consensus disorder prediction 181 227 - -
Amo16g3898 234 Pfam Protein kinase domain 9 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3898 234 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 144 IPR045874 GO:0004672
Amo16g3898 234 SMART serkin_6 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3898 234 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3898 234 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 163 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3898 Amo-Chr16 150768175 150769063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3898 1 143 Receptor kinase-like Gene Family AT1G66910 59.441 3.05e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo16g3898 Pkinase 2.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3898 - - ahf:112697889 319.701