Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3896 ATGAAGGTATCGGCATTGTTTCTGCTGCTGCTTCTAAATCTGAATCTTGGGAACTGCCAGCTGGATCAGCATCCTCCGGTTCCATGTCCGTTCCATTTGTACTGTGAAAAAAACAAAGACAGTTTTGTTCTTGAGCTAACCGGCTCTTCATCTTTAGTGAAACTCCCCGTCCGTCAAATTGATTACACATCACAAACTTTACAAATTTATGATCCCAAACACTGCCTTCCAGAACTCTTTCTCACACTGAATTACTCATCATTTTATCCTTTCCGATCCTATAGAGAGTTTTTCGACGATATGGAACTTTCTCTTGACGGTGAGACCAACCTTACTTTCTTTAATTGTTCTTCGACAGACTCCGACTCCCAGGAACAAGATACTTTATCTTGCCCGATTCGTGTGGCTGGCGATGAAGACGCCGTCGACTCAGGCTTGGTCTCCTGCACAAAACTGGTTACTAATCTTATGCAATTAAGGCCAAATCTGATACAGGGAAATTCAATCAACTTGGTATGGGATAATACAAGTTTTCCTAGTGGCCATGGATGCTTTGTTGGCTGTAACAGAGGGAAGCCTAAAGCATGGAAGGAGTATCAACCCATTATTTTACCCATTACAGGTGCAGCTCTCCTTGTGTCAATACTCGGTGCCTTGTATTATATACATCGCTATTACATAAACAAAGGGGAAGATCAACAAAGAGTTGAAACTTTTTTGAAGGACTATGAGGCATTAAACCCAACAAGATTCTCTTATGCTGATATCAAGAGAATTACTAAGCAGTTTAAGGACAAGTTAGGTGAAGGTGCTCACGGAGCTGTATATAAAGGAAAATTGTCCAACAAAATTCTTGTTGCTGTCAAGATTCTCACTAACACAGACGGCGATGGCAAAGAATTCATAAATGAAGTGGGAACAATGGCCAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTGGTTTATCACTTCTTCCCCAATGGTAATCTCCAGACCTTCATTGCTTCGTCCAGCGACAAGGAAAACTTTCTTGGATGGAACAAGATGCATCAGATTGCTCTCGGCATAGCTAGAGGGATTGAATACCTTCACCAAGGCTGTGATCAAAGAATTCTGCATTTTGATATTAATCCTTACAATGTCTTGTTAGATGACAATTTCACTCCAAAAATTTCAGATTTCGGTTTGGCTAAGTTATGCTCCAAAAATCGAAGTACTGTATCCATGACTGCGGCAAGGGGAACTTTAGGATACATGGCGCCTGAAGTTTTTTCTAGAAACTTCGGCAACGTATCTTACAAATCCGATATCTACAGTTATGGGATGTTATTGCTTGAGATGGTTGGAGGAAGAAAAAACACAAACGAGAATCAAGAAACATTTCAAGTTCTATATCCCAATTGGATACACAATTTGCTTGAAGGAGATGACACATATATTCCAATTGACGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTTCACCGTCCCTCCATGAAAAGTGTAGTTCATATGCTTGAAGGAGAGGAAGACAAGTTGAAAGTGCCGCCAAATCCTTTTGAATCTGCCGCTGAGAGTAGTTCAAGTGCAAATATTCCAGCAAGATGCTTGAATTTGGAACTGGAAGTGATTCCAGAAACAGACTAG 1719 0.4142 MKVSALFLLLLLNLNLGNCQLDQHPPVPCPFHLYCEKNKDSFVLELTGSSSLVKLPVRQIDYTSQTLQIYDPKHCLPELFLTLNYSSFYPFRSYREFFDDMELSLDGETNLTFFNCSSTDSDSQEQDTLSCPIRVAGDEDAVDSGLVSCTKLVTNLMQLRPNLIQGNSINLVWDNTSFPSGHGCFVGCNRGKPKAWKEYQPIILPITGAALLVSILGALYYIHRYYINKGEDQQRVETFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSNKILVAVKILTNTDGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQTFIASSSDKENFLGWNKMHQIALGIARGIEYLHQGCDQRILHFDINPYNVLLDDNFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNENQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVHMLEGEEDKLKVPPNPFESAAESSSSANIPARCLNLELEVIPETD* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3896 572 Gene3D Transferase(Phosphotransferase) domain 1 336 544 - -
Amo16g3896 572 SUPERFAMILY Protein kinase-like (PK-like) 241 531 IPR011009 -
Amo16g3896 572 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 571 - -
Amo16g3896 572 Pfam Protein tyrosine and serine/threonine kinase 263 529 IPR001245 GO:0004672|GO:0006468
Amo16g3896 572 ProSiteProfiles Protein kinase domain profile. 261 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3896 572 Gene3D Phosphorylase Kinase; domain 1 234 335 - -
Amo16g3896 572 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 571 IPR045874 GO:0004672
Amo16g3896 572 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3896 Amo-Chr16 150749207 150751071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3896 206 543 Receptor kinase-like Gene Family AT1G66910 46.532 3.08e-103 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo16g3896 PK_Tyr_Ser-Thr 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3896 - - adu:110273083 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3896 16 150749207 150751071 Amo16g3896 16 150749207 150751071 ECH