Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3895 ATGATCATGAAAAGAGGGGAAGGCTTCTCCTGCTCACTCTTAAACTACTTGCTCCTAATTACCATAGTTGCATCCGCCGCCGTGGGTCATAACAGAAGATGTGCTCCATCTGCGTGCGGCAAAGTTACCAACATAACGCATCCTTTCCGGCTGAAGGATGACCCAGAATATTGTGGCGATCGGAGGTATGAGCTGGCTTGCGAGAATAACATCGCGGTGCTAGCTTTGTTCCCGGGGAAAAACTACCATGTTCAATCAATAAATTACAATAACTACACAATCCGACTCGTAGATCCCGGGATCTTAGAGGATGATTGTTCCACCCTTCCTAACTATTCCATATCCAATTCCTATTTGACGAATGAAGATGCAAGGGAACCATATGAAGACAATCAAAAGCGAGAGAGTGCTTTAGATAATGGCATGTCCAGATCCTTAACAGTATTCTGTAACGTGGTTTTCTTGGAGTGCAGCAATCCGGTGAGGGACGATCCACGATACGTGGACACTGCACCTTGCGTTAAACAAGGCCGCAATTTTTATGCTGTTTTTGGATACATGTGGGTGCATGAATTAAAAGATGATTGCAGTGTGAAGCTGGTTGCTGCCACATCATCCTTTCCTGCTCCACCGAGATGGCCATATGATCAATCATTCTTGAGATGCGGCCAAAACTATTCATACACTGAGATTCATAGGATGCTCAGTTATGGATTTGAGGTTTCGTGGCTACCTGGTGTTTGTGAGTGTGGACCGAGGAGGTCTTGCATAATTGACGAAACCGCTCGAAGTGGTATCTCATGTTACGGCGGCGAAAACTGTTACACTCCAATTCTGATGGCCGAATGTGGAAAGGTGTCGAAGCTCCAAATAATCGCAGAAGATTACGCGTATGGAATTTTGAAAGGACTTCGAAAAGTAGTAGGAAAAGATGGTGGTGATACCTTCTATAAAGCAGATGTATTAGCTATTATTAAGCTAGGAGTTTTCACGGGACGGGTTATGGTGCCATACATGGTCGTCAAATTCATATCAGGTCTCGTGTTTTTCTTCATAATGTTGATCTACATAAGCCAAAGAAGACATGCATCAATTTATGAAAATATTGAGGAATTTTTGCAAGGGAACAAACTCATTCCAATAAGATATTCATATAAAGAGATAAAGCAGATGACAAGAGATTTTAAGGAAAAATTGGGAGAAGGAGGATTTGGCTCAGTATACAAGGGAAAGTTACGAAGTGGACCCTTTGTAGCCATAAAAATGTTGGGTAAAGCCAAGGGTAATGGTCAAGATTTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATGTAGTAAGATTGGTTGGATTTTGTGTAGAGGGTTCAAAACGCGCTCTTGTATACGAATTTATGTCGAATGGTTCTCTAGATAAATTTATCTTCTCCAAAGTGGATAGTGTATCATTGACTTACCAGGAACTTTTTGAAATATCTCTTGGAGTGGCTCGTGGTATAGCTTATCTGCATGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCTCACAACATTCTTCTTGACGAGAACTTCATTCCTAAGGTCTCAGACTTTGGTCTTGCAAAGCTTAATCCTCTGGATAACAGTATTGTTTCTTTGAAAACAGCAAGAGGAACCCTTGGTTACATGGCCCCAGAATTGTTCTATAAAAATATTGGTGCAATATCTTACAAGGCTTATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTCAAAGAAGAAACTCGAATCCAAACGCAGAGCATTCAAGCCAATTTTACTTTCCATTTTGGATATATGATCAATTGGCTCAGAAAAGTGATGAGATAAAGGTGGAAATTTTGATGCATGAAGAAACAAGCGAATTAGCAAAAAAGATGTTTACAACTGCGCTGTGGTGTATACAATTGAAGCCAAGTGATCGTCCTTCAATGAATAAAGTAGTGGAAATGTTAGAAGGAGAAGCTGCAAATATTGAAATGCCTCCAAAGCCTTCATATTATCCAAATGATATTATCCACGGAGATTCTGAGATTAACTCAGGAGAAGCTACTTCAAATAATTCTTCTGGCTCTTCGGGTTTTGAGGAGGAAATTGCAACTAACCCTCTGTTAATGTTTTCTGGATGA 2169 0.4043 MIMKRGEGFSCSLLNYLLLITIVASAAVGHNRRCAPSACGKVTNITHPFRLKDDPEYCGDRRYELACENNIAVLALFPGKNYHVQSINYNNYTIRLVDPGILEDDCSTLPNYSISNSYLTNEDAREPYEDNQKRESALDNGMSRSLTVFCNVVFLECSNPVRDDPRYVDTAPCVKQGRNFYAVFGYMWVHELKDDCSVKLVAATSSFPAPPRWPYDQSFLRCGQNYSYTEIHRMLSYGFEVSWLPGVCECGPRRSCIIDETARSGISCYGGENCYTPILMAECGKVSKLQIIAEDYAYGILKGLRKVVGKDGGDTFYKADVLAIIKLGVFTGRVMVPYMVVKFISGLVFFFIMLIYISQRRHASIYENIEEFLQGNKLIPIRYSYKEIKQMTRDFKEKLGEGGFGSVYKGKLRSGPFVAIKMLGKAKGNGQDFISEVATIGRIHHANVVRLVGFCVEGSKRALVYEFMSNGSLDKFIFSKVDSVSLTYQELFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPLDNSIVSLKTARGTLGYMAPELFYKNIGAISYKAYVYSFGMLLMEMASQRRNSNPNAEHSSQFYFPFWIYDQLAQKSDEIKVEILMHEETSELAKKMFTTALWCIQLKPSDRPSMNKVVEMLEGEAANIEMPPKPSYYPNDIIHGDSEINSGEATSNNSSGSSGFEEEIATNPLLMFSG* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3895 722 SUPERFAMILY Protein kinase-like (PK-like) 379 666 IPR011009 -
Amo16g3895 722 ProSiteProfiles Protein kinase domain profile. 393 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3895 722 Pfam Protein kinase domain 395 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3895 722 Pfam Wall-associated receptor kinase galacturonan-binding 34 98 IPR025287 GO:0030247
Amo16g3895 722 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 18 690 - -
Amo16g3895 722 MobiDBLite consensus disorder prediction 692 708 - -
Amo16g3895 722 Gene3D Phosphorylase Kinase; domain 1 370 467 - -
Amo16g3895 722 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 690 IPR045874 GO:0004672
Amo16g3895 722 Gene3D Transferase(Phosphotransferase) domain 1 468 675 - -
Amo16g3895 722 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Amo16g3895 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Amo16g3895 722 SMART serkin_6 393 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3895 722 MobiDBLite consensus disorder prediction 685 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3895 Amo-Chr16 150738634 150743144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3895 9 681 Receptor kinase-like Gene Family AT5G38260 33.476 1.35e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo16g3895 Pkinase 6.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3895 - - ahf:112697889 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3895 16 150738634 150743144 Amo16g3895 16 150738634 150743144 ECH