Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3882 ATGAATCTTATGATGATATCTTTGAAACTACTTTTGTTCATGAATTTGTCCATCATCATCATCACATGCAAGGCCAATCCTAACCAACAAGGTGAACACCTCTCTAAGTTCATTCATTCAAAGAGGTCTCAAAATAATAATAACAAAAATCCATCATCATCATCATCATTGGAAGCTTTCCATTCTCATCTTCCACAACTACATGTTGATGATGATGATGATGAACAATCTAAGCTTAAAGAAGATGATAAAGTTGAAGGTCTACCAGGACAACCTGAAGGAGTGGATTTTGATCAATATGCTGGCTATATAACTCTTGATGCAAACAAAGGGAAAGCACTCTTCTACTACTTTGTTGAGTCACCTCAAAATTCTTCCACCAACCCTCTTCTTCTATGGCTCAATGGAGGGCCAGGGTGCTCTTCTCTGGGGTTTGGAGCAATGGAAGAATTGGGACCTTTTAGAATCAATAGTGATGGAAGAACACTTTACAGAAATCCATATGCATGGAACAATGTTGCAAACGTGATTTTCCTAGAATCACCAGCAGGTGTTGGATTTTCATATTCAAACACTTCCTCGGACTATGCTAAAATTGGCGACAGCATCACCGCCTTGGATTCTTACACATTCCTTGTGAAGTGGCTTGAGAGATTCCCACACTACAAAACACGTGACTTCTTCATAACTGGAGAAAGCTATGCTGGCCATTATGTCCCTCAGCTTGCTCACACTATTCTCTCATATAATAACATTGCAGCGTCAAATCATCAAACAGTTATCAACTTAAAAGGAATTGCGGTTGGAAATGGATGGATAGATGATAATTTGTGTACAAAGGGTATGTATGATTATTACTGGTCACATGCTCTAAGCTCTGACGAATCACATTCTGGAATTGAAAAAAATTGTGACTATGTTAGCGGTAATTTCTCTAATGAATGCATCAAATATATGAACATGGCTGATGTTGAAGTTGGTGATATTGACATATACAACATATATGCTCCACCTTGTGATTCTTCATCTGCATCAAAATCTCCTGGCAATGATTTCGACCCTTGTTCTGATCATTACACAAAGTCCTACTTGAATCTCCCAGAAGTTCAAAAGGCCCTTCATGCTAAAGCCACAAATTGGTCTTCTTGCAGCCTGGTGGGATGGACGGATAGTCCAGCAAGTATTCTACCAACTATAAATAGATTAATATCAAGTAACTTAAGCATCTGGATTTATAGTGGCGACACAGATGGTCGAGTTCCCATAACTTCATCTAGGTATTCAATAAATGCCCTCAAACTTCCAGTGCAGACACCTTGGCGTTCATGGTATTCTGCCAATCAGGTTGGAGGATATGTTGTTGGGTATAAAGGGCTCACTCTTGTAACTGTAAGAGGAGCAGGGCACACTGTTCCAAGCTACCAACCTCAGAGGGCACTAACCATGATCTCATATTTTCTCAATGGAGAACTTCCACCAAAGAATTAA 1488 0.3945 MNLMMISLKLLLFMNLSIIIITCKANPNQQGEHLSKFIHSKRSQNNNNKNPSSSSSLEAFHSHLPQLHVDDDDDEQSKLKEDDKVEGLPGQPEGVDFDQYAGYITLDANKGKALFYYFVESPQNSSTNPLLLWLNGGPGCSSLGFGAMEELGPFRINSDGRTLYRNPYAWNNVANVIFLESPAGVGFSYSNTSSDYAKIGDSITALDSYTFLVKWLERFPHYKTRDFFITGESYAGHYVPQLAHTILSYNNIAASNHQTVINLKGIAVGNGWIDDNLCTKGMYDYYWSHALSSDESHSGIEKNCDYVSGNFSNECIKYMNMADVEVGDIDIYNIYAPPCDSSSASKSPGNDFDPCSDHYTKSYLNLPEVQKALHAKATNWSSCSLVGWTDSPASILPTINRLISSNLSIWIYSGDTDGRVPITSSRYSINALKLPVQTPWRSWYSANQVGGYVVGYKGLTLVTVRGAGHTVPSYQPQRALTMISYFLNGELPPKN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3882 495 PANTHER CARBOXYPEPTIDASE 26 491 - -
Amo16g3882 495 MobiDBLite consensus disorder prediction 68 89 - -
Amo16g3882 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Amo16g3882 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Amo16g3882 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 240 IPR001563 GO:0004185|GO:0006508
Amo16g3882 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Amo16g3882 495 Pfam Serine carboxypeptidase 89 489 IPR001563 GO:0004185|GO:0006508
Amo16g3882 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 491 IPR001563 GO:0004185|GO:0006508
Amo16g3882 495 Gene3D - 395 489 - -
Amo16g3882 495 SUPERFAMILY alpha/beta-Hydrolases 85 490 IPR029058 -
Amo16g3882 495 Gene3D - 355 386 - -
Amo16g3882 495 ProSitePatterns Serine carboxypeptidases, serine active site. 229 236 IPR018202 GO:0004185
Amo16g3882 495 Gene3D alpha/beta hydrolase 76 349 IPR029058 -
Amo16g3882 495 MobiDBLite consensus disorder prediction 68 93 - -
Amo16g3882 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3882 Amo-Chr16 150620712 150626399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3882 360 490 Calmodulin-binding Proteins AT2G22960 31.387 3.94e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3882 K16297 - gmx:100818983 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3882 16 150620712 150626399 Amo16g3882 16 150620712 150626399 ECH