Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3822 ATGGCCCACCAAGACAACCCCACGCGCCCTCAGCGCGAGGCCAAAAAGAGGGCAGCAGCTGCACTCTCCGAGCTCCAAACCGGCGCGTCCAAGAAGAAGCGCGTCGTGTTGGGCGAACTCACTAACATCACCAACTCCAGCGTTGTACCACCACAACCACAACAACCTGCCAAGCCGGTTCTCGATAACCGCCGGTTTAATCAGAACGAGGAGAAAATAAAAACCACCAATACCAGGGGAAAGAAGAGAACGGTCGGGAAAAACCAGAAACCGGCGGTGACTCCACCGGAAACTGTTGACGCCGCAAAGAAGCCGGAAGTTACTGTTGATCCGCAATTATGTGCTCCTTATGTTTCTGATATCTACGATTATCTTCGTAAAATGGAGGAAGATCCAAGTAAGAGGCCACTACCGGATTATGTGCAGAAAGTGCAGAGGCATGTGAATGCAAACATGAGGGGTGTTCTTGTGGATTGGTTAGTAGAGGTTGCCGAGGAGTACAAGCTTGTTTCCGATACCCTTTACTTCTCAGTTTCGTACATTGACAGATACTTGTCTTTGACTGCCTTATCAAGTCAAAAGCTGCAGTTGCTTGGTGTTTCAGCAATGCTTATTGCATCAAAATATGAGGAGATAAAGCCACCTGAGGTGGAAGAATTTTGTTACATTACAGACAACACATACACCAAGGATCAGGTTGTGGAGATGGAAGCTGATATATTGAAGTCTTTGAAGTTTGAATTGGGTGGTCCAACAGTAAAGACCTTTCTAAGAAGATTCTCTAAAGTTGCTCAAGAGAGCAAAGATACATCAGACTTGCAATTTGAGTTTCTCACTAGCTACCTCGCGGAGCTCAGTTTGTTGGATTATAATTGTGTGAAATTTTTGCCTTCTTTGGTGGCAGCATCTGTTGTATTTCTAGCAAGATTTATGCTAAGCCCAAAGAAACATCCTTGGAATGCAGCACTTTATCAACTCACTAGATATAAACCAGCCGAATTGAAGGAATGTGCTCAAAATATACATGATCTGTACCTCAGCAGGAGAGGTGGCTCTTTGCAAGCTGTGAGAGAGAAATACAAACAACATAAGTTCAAATGCGTGGCCACAACTCCGTCACCTCCAGAGATTCCCGTTTCTTATTTTGAATTTAGAGTGGCAGATCCATAG 1170 0.4496 MAHQDNPTRPQREAKKRAAAALSELQTGASKKKRVVLGELTNITNSSVVPPQPQQPAKPVLDNRRFNQNEEKIKTTNTRGKKRTVGKNQKPAVTPPETVDAAKKPEVTVDPQLCAPYVSDIYDYLRKMEEDPSKRPLPDYVQKVQRHVNANMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRYLSLTALSSQKLQLLGVSAMLIASKYEEIKPPEVEEFCYITDNTYTKDQVVEMEADILKSLKFELGGPTVKTFLRRFSKVAQESKDTSDLQFEFLTSYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSPKKHPWNAALYQLTRYKPAELKECAQNIHDLYLSRRGGSLQAVREKYKQHKFKCVATTPSPPEIPVSYFEFRVADP* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3822 389 CDD CYCLIN 251 342 IPR013763 -
Amo16g3822 389 PANTHER CYCLINS 24 385 IPR039361 -
Amo16g3822 389 SUPERFAMILY Cyclin-like 110 248 IPR036915 -
Amo16g3822 389 Pfam Cyclin, C-terminal domain 251 373 IPR004367 -
Amo16g3822 389 ProSitePatterns Cyclins signature. 153 184 IPR006671 -
Amo16g3822 389 MobiDBLite consensus disorder prediction 1 28 - -
Amo16g3822 389 CDD CYCLIN 152 241 IPR013763 -
Amo16g3822 389 SUPERFAMILY Cyclin-like 251 376 IPR036915 -
Amo16g3822 389 MobiDBLite consensus disorder prediction 1 19 - -
Amo16g3822 389 SMART Cyclin_C_2 251 374 IPR004367 -
Amo16g3822 389 MobiDBLite consensus disorder prediction 66 97 - -
Amo16g3822 389 Gene3D - 136 249 - -
Amo16g3822 389 Pfam Cyclin, N-terminal domain 120 248 IPR006671 -
Amo16g3822 389 SMART cyclin_7 158 242 IPR013763 -
Amo16g3822 389 SMART cyclin_7 255 343 IPR013763 -
Amo16g3822 389 PIRSF Cyclin_A_B_D_E 1 381 IPR039361 -
Amo16g3822 389 Gene3D - 120 370 - -
Amo16g3822 389 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 24 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3822 Amo-Chr16 149984624 149987610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3822 1 383 Core Cell Cycle Gene Families AT1G47230 56.623 2.54e-151 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3822 K06627 - gmx:100801988 525.013