Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3799 ATGTCTCATGAAGTTTACAARTTTGGAGAAGGATTACTAGGGAAAGTGGCTGCAGATAATAGTCACAAATGGGTTTATGGTGACACTCAAAATGGGTGTGAATCTGACTACGTTGGTACATGGAATTCTTCAAGTGATCATCAACCAAGAGCTTGGGAGTTTCAGTTCAATTCAGGTATTCAGACTGTTGCTGTCATTGGTGTTAGAGAAGGCTTAGTGCAACTTGGTTCATTTAACAAGATAGCTGAAGATCTGAACATAGTAATGAGCATACAAAGAAAATTCAGCTACCTTCAAAGCATACCAGGTGTGTTTGCAATTCAAAGACCATCATACTTACCCATCCAACAACAAAATCCATACATTGCAAAATCCAATTTCCAAATCATGGACTCCAATAATGACATGCCTCTCTCAAACTACAACATGGTAATCAACCAAATTGGATCAACTAATAATAACAATAGTAGTAGTAGAATACTTGAAGAAAAATCAAACTATTTTTCAATGGTAGCAATCAACATGATGGGAAGGAATAATAATAATAATAATAATAGCCTACAAGATGGAACACAACAAGGGTCAATGCAACAACAAAGTCTTTGGTCAGGTCCTTCTACTTTGCCAAACATGTCTTGTAGTCTTGGTGCATTGCTATCAAGGCTTCCTAATGAAGTTCCATCATGCTTTAATCCCAACTCTCAAGTTCTTGAAACCAATAATAGGATGATCATCAACACCACAACCCAAAGGGTGAAGATTGAAGACTCTGGATTTCATCTTGGTGGTGATGCTGATCATAAAGAAAACGCTAGGTCGTAA 822 0.371 MSHEVYKFGEGLLGKVAADNSHKWVYGDTQNGCESDYVGTWNSSSDHQPRAWEFQFNSGIQTVAVIGVREGLVQLGSFNKIAEDLNIVMSIQRKFSYLQSIPGVFAIQRPSYLPIQQQNPYIAKSNFQIMDSNNDMPLSNYNMVINQIGSTNNNNSSSRILEEKSNYFSMVAINMMGRNNNNNNNSLQDGTQQGSMQQQSLWSGPSTLPNMSCSLGALLSRLPNEVPSCFNPNSQVLETNNRMIINTTTQRVKIEDSGFHLGGDADHKENARS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3799 273 MobiDBLite consensus disorder prediction 178 203 - -
Amo16g3799 273 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 3 95 IPR025610 -
Amo16g3799 273 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 256 - -
Amo16g3799 273 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3799 Amo-Chr16 149487194 149489799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3799 1 99 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.000 1.56e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3799 - - ahf:112697798 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3799 16 149487194 149489799 Amo16g3799 16 149487194 149489799 ECH