Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3764 ATGGGAACAAATCTGAGTTTTCCCAAAACTGAAAAGTTTTCTGAAGACGGAGAAAATGACTGTCTTAGATATGGTTTGTCATCGATGCAAGGGTGGCGCGCAACAATGGAAGATGCTCATGCTGCACATCTTGATGTGGATGCGTCCACTTCATTTTTTGGTGTATATGATGGGCATGGAGGTAAGGCGGTTGCAAAGTTCTGTGCCAAGTATCTTCACCTTCAGGTGCTTAAGAGTAAAGCATACCTTGATGGAGATGTAGCAGTTTCTCTTCAGAAAGCTTTTTTCAGAATGGACGAGATGATGCAGGGTCAAAGAGGTTGGAGGGAATTAGCAGCCTTGGGTGATAAGATGAACAAGTTTAATGGGATGATGGAAGGTTTGATTCGGTCTCCACGCGGCAACAATGGTAATTGCCAAAGTGATGATTGGACTTTTGAGGAGGGGCCCCATTCCAATTTTGCTGGACCAACTTCTGGAAGCACTGCTTGTGTAGCAATTGTTAAAAACAACCAACTTTTTATTGCAAATGCCGGTGATTCGCGTTGTGTTTTGTCTAGGAAGGGTCAGGCATACAATTTAACAAGAGACCACAAACCTGACCTTGCGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTCATTCATGCAGGACGAGTTAATGGGAGTTTAAATCTTGCAAGAGCTATAGGTGACGTGGAATTTAAGCAGAATAAATTTCTCTCAGTTGAAACACAGATTGTGACTGCAAATCCAGATATAAACATTGTTGATCTTTGCGACGAAGATGAATTTATGGTGCTCGCTTGTGATGGCATATGGGACTGCATGTCGAGTCAACAATTGGTTGATTTCGTGCGTCAAGAACTGCTGTTGGAAACAAAACTTTCTGCGGTGTGTGAGCGAGTACTAGATCGTTGTTTGGCACCGTCAATTACTATTGGCGAGGGATGCGATAACATGACCATGATCTTGGTGCAGTTCAGAAAACCTTCCCAATTCATGCCCCAACAGAAGAGCAGTACTCTTCAAATGAAGCAAAACTAG 1050 0.4286 MGTNLSFPKTEKFSEDGENDCLRYGLSSMQGWRATMEDAHAAHLDVDASTSFFGVYDGHGGKAVAKFCAKYLHLQVLKSKAYLDGDVAVSLQKAFFRMDEMMQGQRGWRELAALGDKMNKFNGMMEGLIRSPRGNNGNCQSDDWTFEEGPHSNFAGPTSGSTACVAIVKNNQLFIANAGDSRCVLSRKGQAYNLTRDHKPDLAIEKERILKAGGFIHAGRVNGSLNLARAIGDVEFKQNKFLSVETQIVTANPDINIVDLCDEDEFMVLACDGIWDCMSSQQLVDFVRQELLLETKLSAVCERVLDRCLAPSITIGEGCDNMTMILVQFRKPSQFMPQQKSSTLQMKQN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3764 349 SMART PP2C_SIG_2 28 329 IPR001932 -
Amo16g3764 349 Gene3D - 1 330 IPR036457 -
Amo16g3764 349 PANTHER PROTEIN PHOSPHATASE 2C 1 338 IPR015655 GO:0004722|GO:0006470
Amo16g3764 349 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Amo16g3764 349 CDD PP2Cc 23 329 IPR001932 -
Amo16g3764 349 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Amo16g3764 349 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 338 - -
Amo16g3764 349 SMART PP2C_4 12 327 IPR001932 -
Amo16g3764 349 SUPERFAMILY PP2C-like 4 331 IPR036457 -
Amo16g3764 349 Pfam Protein phosphatase 2C 142 311 IPR001932 -
Amo16g3764 349 Pfam Protein phosphatase 2C 23 103 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3764 Amo-Chr16 149044534 149049629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3764 1 333 PP2C-type Phosphatase Gene Family AT2G25070 75.075 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3764 K17499 - gmx:100787778 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3764 16 149044534 149049629 Amo16g3764 16 149044534 149049629 ECH
Amo16g3764 16 149044534 149049629 Amo10g2267 10 79535215 79539920 PCT
Amo16g3764 16 149044534 149049629 Amo18g3466 18 137778863 137783249 PCT
Amo10g2267 10 79535215 79539920 Amo16g3764 16 149044534 149049629 PCT
Amo18g3466 18 137778863 137783249 Amo16g3764 16 149044534 149049629 PCT