Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3725 ATGGATTCAACATGCGTTGATACTTCACTCAACCTCAATCTTTCTCCTTCTCCAACTCATATGAACCCTACTGTGGAAGTAGTTTTGGTTGAAGAGTTACATCGTTTGAGTTGTGAGAACAAGAGGCTTACGGAAACGTTGACTCACATGTGCGTTAGCTATGAAGCTTTGCAAAAGCATTTGACCAAATTGATGAACACATCATCTGATTGTTATAATCATCATCAATCGCGGAAGAGAAAAGCTGAAAGCTATGAAAATTGTAACGATGAGGAGGAGTCATTATTACTCATCAAAAGGCCTAATAACATTGTTCATAATAATAATAATAAGGTTTCCAAGGTTCTTGTGAAGACAGATGCATCTGATTCTAGCTTGTATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTGACTAGAGACAACCCTTCTCCAAGAGCGTACTTTCGTTGCTCCTTCGCCCCAAGTTGCCCAGTGAAAAAGAAGGTGCAAAGAAGTGTTGAAGACCCAACAATACTTGTAGCAACATATGAAGGGGAGCACAACCATGGGCGTAGCCAAACTGAAATTTCACTTGTCTCATCCCAAAGCCATTCAAGTGAAACAATAATCCCTTTAGTTTCTTCACCATCATCACGTATTACGTCATCTCCAACTACTCTTGACTTGGTCAAAAATTCAATAAGTTCCGTTGACATTGATCACAATGCTCAAAACAAGTCTTCTTCTTCTTCTTATATCCATAAGTTTTTGGTTCAAGAAATGGCCACTTCCTTGACAAGTGATCCTAACTTCACGGCAGTACTTGCCACTGCAATTTCAGGAAAAATTCTAGAACAGACTTCTCTGGAAAAATTGTGA 870 0.3908 MDSTCVDTSLNLNLSPSPTHMNPTVEVVLVEELHRLSCENKRLTETLTHMCVSYEALQKHLTKLMNTSSDCYNHHQSRKRKAESYENCNDEEESLLLIKRPNNIVHNNNNKVSKVLVKTDASDSSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSVEDPTILVATYEGEHNHGRSQTEISLVSSQSHSSETIIPLVSSPSSRITSSPTTLDLVKNSISSVDIDHNAQNKSSSSSYIHKFLVQEMATSLTSDPNFTAVLATAISGKILEQTSLEKL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3725 289 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g3725 289 SUPERFAMILY WRKY DNA-binding domain 127 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo16g3725 289 ProSiteProfiles WRKY domain profile. 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g3725 289 Gene3D WRKY domain 111 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo16g3725 289 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 283 IPR044810 GO:0003700
Amo16g3725 289 SMART WRKY_cls 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g3725 289 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3725 Amo-Chr16 148579908 148581904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3725 3 288 WRKY Transcription Factor Family AT1G80840 43.131 5.78e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo16g3725 WRKY 1.4e-23 CL0274