Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo16g3725 | ATGGATTCAACATGCGTTGATACTTCACTCAACCTCAATCTTTCTCCTTCTCCAACTCATATGAACCCTACTGTGGAAGTAGTTTTGGTTGAAGAGTTACATCGTTTGAGTTGTGAGAACAAGAGGCTTACGGAAACGTTGACTCACATGTGCGTTAGCTATGAAGCTTTGCAAAAGCATTTGACCAAATTGATGAACACATCATCTGATTGTTATAATCATCATCAATCGCGGAAGAGAAAAGCTGAAAGCTATGAAAATTGTAACGATGAGGAGGAGTCATTATTACTCATCAAAAGGCCTAATAACATTGTTCATAATAATAATAATAAGGTTTCCAAGGTTCTTGTGAAGACAGATGCATCTGATTCTAGCTTGTATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTGACTAGAGACAACCCTTCTCCAAGAGCGTACTTTCGTTGCTCCTTCGCCCCAAGTTGCCCAGTGAAAAAGAAGGTGCAAAGAAGTGTTGAAGACCCAACAATACTTGTAGCAACATATGAAGGGGAGCACAACCATGGGCGTAGCCAAACTGAAATTTCACTTGTCTCATCCCAAAGCCATTCAAGTGAAACAATAATCCCTTTAGTTTCTTCACCATCATCACGTATTACGTCATCTCCAACTACTCTTGACTTGGTCAAAAATTCAATAAGTTCCGTTGACATTGATCACAATGCTCAAAACAAGTCTTCTTCTTCTTCTTATATCCATAAGTTTTTGGTTCAAGAAATGGCCACTTCCTTGACAAGTGATCCTAACTTCACGGCAGTACTTGCCACTGCAATTTCAGGAAAAATTCTAGAACAGACTTCTCTGGAAAAATTGTGA | 870 | 0.3908 | MDSTCVDTSLNLNLSPSPTHMNPTVEVVLVEELHRLSCENKRLTETLTHMCVSYEALQKHLTKLMNTSSDCYNHHQSRKRKAESYENCNDEEESLLLIKRPNNIVHNNNNKVSKVLVKTDASDSSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSVEDPTILVATYEGEHNHGRSQTEISLVSSQSHSSETIIPLVSSPSSRITSSPTTLDLVKNSISSVDIDHNAQNKSSSSSYIHKFLVQEMATSLTSDPNFTAVLATAISGKILEQTSLEKL* | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo16g3725 | 289 | Pfam | WRKY DNA -binding domain | 130 | 186 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo16g3725 | 289 | SUPERFAMILY | WRKY DNA-binding domain | 127 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo16g3725 | 289 | ProSiteProfiles | WRKY domain profile. | 130 | 189 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo16g3725 | 289 | Gene3D | WRKY domain | 111 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo16g3725 | 289 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 283 | IPR044810 | GO:0003700 | |
Amo16g3725 | 289 | SMART | WRKY_cls | 128 | 188 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo16g3725 | 289 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 1 | 283 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo16g3725 | Amo-Chr16 | 148579908 | 148581904 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo16g3725 | 3 | 288 | WRKY Transcription Factor Family | AT1G80840 | 43.131 | 5.78e-72 | 222 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Amo16g3725 | WRKY | 1.4e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo16g3725 | - | - | gmx:100810978 | 294.664 |