Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3696 ATGGATGAAGAAGAACAAGGTAAAGGAGACTACCAAACAAAAATCCAGTTTTTGATTGTTGAAATGTCTCGCGTTACTGACATAGACACCAGTGTCATCCATGCCCTTGAAGAGTTACATAGAAGTCTTGAGAAGAGAGATGTTGAGGGGCCAAGAGTCAAATTAAAGAATGTATCATGGGCCATCACAACCTTAGCTTTGAAGCAAACTGCAGCTCCTGTTTTGAGTGAAGAATTGGACCCCATGTTACACCTGTCACTATTAACCCAAGTGATTTGCGTGGTTCTTTTCACAAAGGAAAGGATGACAATGACACAAATTGTTGGACTTCTCCTAGTGGAAAAGGATTTATGA 354 0.404 MDEEEQGKGDYQTKIQFLIVEMSRVTDIDTSVIHALEELHRSLEKRDVEGPRVKLKNVSWAITTLALKQTAAPVLSEELDPMLHLSLLTQVICVVLFTKERMTMTQIVGLLLVEKDL* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3696 117 SUPERFAMILY SpoIIaa-like 13 62 IPR036513 -
Amo16g3696 117 Pfam STAS domain 11 49 IPR002645 -
Amo16g3696 117 ProSiteProfiles STAS domain profile. 1 59 IPR002645 -
Amo16g3696 117 PANTHER SULFATE TRANSPORTER 1 63 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo16g3696 117 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 1 63 - -
Amo16g3696 117 Gene3D STAS domain 1 74 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3696 Amo-Chr16 148043229 148046679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3696 2 49 Inorganic Solute Cotransporters AT1G22150 62.500 8.12e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3696 K17470 - adu:107493537 223.016