Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3694 ATGGTTATACAAAGTGAACCCAGCGCTGTCATTCGAGGGAAGAAGGGTCTTGGTGGTGTTACCATTAAGAAGACGAATCAGGCGTTGATCATCGGAATCTACGATGAGCTGATGACTCCAGGGCAGTGCAACATGATTGTTGAAAGGCTGGGTGATTATCTCATTGATACGGTCATGGGATCTGCGTCTAGGGAAGAAGTTATGCGGGTATCTGTATACATTTTACAAGTGGTTTTAATGCTACGGGCATAG 252 0.4524 MVIQSEPSAVIRGKKGLGGVTIKKTNQALIIGIYDELMTPGQCNMIVERLGDYLIDTVMGSASREEVMRVSVYILQVVLMLRA* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3694 83 Pfam Profilin 1 56 IPR005455 GO:0003779
Amo16g3694 83 Gene3D Dynein light chain 2a, cytoplasmic 1 64 - -
Amo16g3694 83 SUPERFAMILY Profilin (actin-binding protein) 1 56 IPR036140 -
Amo16g3694 83 PANTHER PROFILIN-2 1 57 - -
Amo16g3694 83 PANTHER PROFILIN 1 57 IPR005455 GO:0003779
Amo16g3694 83 PRINTS Plant profilin signature 12 27 IPR005455 GO:0003779
Amo16g3694 83 PRINTS Plant profilin signature 32 45 IPR005455 GO:0003779
Amo16g3694 83 PRINTS Plant profilin signature 45 58 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3694 Amo-Chr16 148006972 148007682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3694 1 57 Cytoskeleton Gene Families AT2G19760 77.193 2.32e-27 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3694 K05759 - ncol:116263069 105.145