Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3677 ATGAAATCCTTAGTAAGTAGTGCTGATGATGCTGATAGGAATCTTCACATTGTATACATGGGATCACTCCCAAAGCATAATTATTCTCCAACATCTCACCATCTTAGTATGCTGCAACAAATTACTAATGATAACGATGCAACAAATCACATGGTTAGAAGTTATTATAAGAGCTTTAATGGTTTTGCTGCAATGATCACTAACCAAGAAAGAGAGAAGCTGAAAAAGATGGAAGGAGTGGTTTCTGTTTTTCCAAGCAAATCACTCAAACCACAAACTACAAGGTCTTGGGACTTCATGGGATTCAAAGAATCGATACAGAGAAACAAAACCGCTGAGAGTGATGTTATAATCGGAGTTATAGACACCGGAATCTGGCCGGAGTCAGAGAGCTTCAACGATCATGGTTTCGGTCCAATTCCCAAAAAGTGGAAAGGCGCATGCAAAGGTGGTAAAAACTTCAGATGCAACAATAAAATAATCGGTGCAAGATACTATCTAAAAGATCAACCTTCCGCAAGAGACATTATTGGGCATGGAACTCACACAGCATCAGTTGCAGCAGGGAATAAAGTTGTGGGAGCAAGCTTCAATGGAATCGCCGAAGGAGTTGCAAGAGGAGGTGTCCCATCAGCAAGAATTGCTGCTTATAATGTGTGTAATGAAGAACAAGGGTGCAGACCTGATGCCATATTGGCTGCTTTTGATGATGCCATTGCCGATGGTGTGGATCTTATCACAATTTCAATTGGGCAACCTGAGCAAATGACCTTTGATAAAGACACCATAGCAATTGGATCGTTTCATGCAATGAAAAAAGGAATCCTCACTATAAACTCTACAGGTAACGATGGTCCTAACAATGCAACATCTAGTGTATCACCTTGGTTGTTCACTGTTGCAGCTACCACTATGGATCGTAGAAACATTGATAACGTTTTGCTTGGCAATGGATTAATGCCTTCGGGGAAGTCAATAAATGGGTCTGCATCAAATAGTGCTGAAATACTGAGTAGCACAGGCTTCATAAACAATAGTGCTCCAATTGTTGCTGAATTCTCTTCTGTAGGACCCAATATGCAAATCAGAGAAATCATGAAGCCAGATGTTAGTGCTCCTGGTGTAGAAATTTTGGCTGCTTACTCACCTCTTGCACCACCTTCTCCTGATAAAAGAGATGAAAGATCTGTGAAATACAACATACTCTCTGGAACCTCAATGGCATGCCCCCATGTTGCTGGTGCAGCTGCATATGTTAAGACTTTTCATCCTGATTGGTCTCCGGCAGCTATAAAGTCTTCTCTTATGACCACTGCAAAACCAATGAATGGAAGTGAACTCGCAGAATTCTCCTATGGATCAGGGTTTTTGGACCCAGTTAGAGCCATAAATCCTGGTCTAGTTTTTGATGCTTCCAAAAAGGACTATGTGAATTTGCTTTGCAGAATTGGGTATGATACAATGGAAGTTCGAAAAATCTCAGGAGACAAAATTACAAATGTTGGATTCGCTAACTCTACCTATAAGGCTTACATCCAACAACATTCTGGCATCAACATCACTGTTGTGCCTAACATACTCGAGTTTAAATCTCTCAAGGAGAAACAATCTTTTGTTGTTCATGTTGATGGAGGGAAATTTAGTGACAAAAGTGTAGTTTCATCGTCACTGTTGTGGAGCGATGGAACACATAGTGTGGATATCTTCTTAACAATACAGGGCTTCTTGGTATTGTTTGCTTATGCCACTCTTGCCACATGTCAGTTCTTAAGTTTTGTGAGCATGCAGGGTTATATGGCATCAACCCAGGGGATGCTGTTCATATGGAAAATGGTGAGACCATTGCACAATGGACCTATTAAAGTTTGGGGTAAGACAGTTGAGCTTATCGCCTGCTTGGTTTTTCTGTGGCTTGAAAACCTGACTACTAAAGGAAAAAAAAAATTTTTGACTTTGGTTACTCTTACTGAGAATATCTGCCATGTACATTGTCTTGGAGGAGGGTAG 2007 0.4071 MKSLVSSADDADRNLHIVYMGSLPKHNYSPTSHHLSMLQQITNDNDATNHMVRSYYKSFNGFAAMITNQEREKLKKMEGVVSVFPSKSLKPQTTRSWDFMGFKESIQRNKTAESDVIIGVIDTGIWPESESFNDHGFGPIPKKWKGACKGGKNFRCNNKIIGARYYLKDQPSARDIIGHGTHTASVAAGNKVVGASFNGIAEGVARGGVPSARIAAYNVCNEEQGCRPDAILAAFDDAIADGVDLITISIGQPEQMTFDKDTIAIGSFHAMKKGILTINSTGNDGPNNATSSVSPWLFTVAATTMDRRNIDNVLLGNGLMPSGKSINGSASNSAEILSSTGFINNSAPIVAEFSSVGPNMQIREIMKPDVSAPGVEILAAYSPLAPPSPDKRDERSVKYNILSGTSMACPHVAGAAAYVKTFHPDWSPAAIKSSLMTTAKPMNGSELAEFSYGSGFLDPVRAINPGLVFDASKKDYVNLLCRIGYDTMEVRKISGDKITNVGFANSTYKAYIQQHSGINITVVPNILEFKSLKEKQSFVVHVDGGKFSDKSVVSSSLLWSDGTHSVDIFLTIQGFLVLFAYATLATCQFLSFVSMQGYMASTQGMLFIWKMVRPLHNGPIKVWGKTVELIACLVFLWLENLTTKGKKKFLTLVTLTENICHVHCLGGG* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3677 668 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 332 498 - -
Amo16g3677 668 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 498 572 - -
Amo16g3677 668 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 15 329 - -
Amo16g3677 668 Gene3D Peptidase S8/S53 domain 93 479 IPR036852 GO:0004252|GO:0006508
Amo16g3677 668 Pfam Peptidase inhibitor I9 16 90 IPR010259 -
Amo16g3677 668 PRINTS Subtilisin serine protease family (S8) signature 113 132 IPR015500 -
Amo16g3677 668 PRINTS Subtilisin serine protease family (S8) signature 175 188 IPR015500 -
Amo16g3677 668 PRINTS Subtilisin serine protease family (S8) signature 403 419 IPR015500 -
Amo16g3677 668 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 91 IPR037045 -
Amo16g3677 668 Pfam Fibronectin type-III domain 497 570 IPR041469 -
Amo16g3677 668 ProSitePatterns Serine proteases, subtilase family, serine active site. 404 414 IPR023828 -
Amo16g3677 668 Gene3D - 497 574 - -
Amo16g3677 668 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 332 498 IPR045051 -
Amo16g3677 668 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 498 572 IPR045051 -
Amo16g3677 668 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 329 IPR045051 -
Amo16g3677 668 CDD Peptidases_S8_3 89 439 IPR034197 -
Amo16g3677 668 ProSiteProfiles Serine proteases, subtilase domain profile. 96 463 - -
Amo16g3677 668 Pfam Subtilase family 114 455 IPR000209 GO:0006508|GO:0008236
Amo16g3677 668 SUPERFAMILY Subtilisin-like 95 464 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3677 Amo-Chr16 147714638 147718309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3677 331 566 Subtilisin-like Serine Gene Family AT5G59130 42.599 2.25e-59 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3677 - - ahf:112755745 1070.46