Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3665 ATGGGGTTCAAAGAATCGATACATAGAAACAAAACTGGTGAGAGTGATGTTATAATCGGAGTTATAGACACCGGAATCTGGCCGGAGTCAGAGAGCTTCAACGATCATGGTTTCGGTCCAATTCCCAAAAAATGGAAAGGTGCATGCAAAGGTGGTAAAAACTTCAGATGCAACAAAAAAATAATCGGTGCAAGATACTATCTAAAAGATCAACCTTCAACAAGAGACATTGTTGGGCATGGAAGCCACACAGCATCAATTGCAGCAGGGAATAAAGTTGTGGGAGCAAGCTTTTATGGAATCGCTGAAGGAGTTGCAAGAGGAGGTGTCCCATCGGCAAGAATTGCTGCTTATAGTGTGTGTAGTGAACAAGGATGTACAGATGATGCCATATTGGCTGCTTTTGATGATGCCATTGCCGATGGTGTGGATCTTATCACAATTTCAATTGGGGCAGATGAGCAAATGACCTTTGATAAAGACATCATAGCAATTGGATCTTTTCATGCAATGGAAAAAGGGATCCTCACTATACACTCTGCAGATCGTAGAATCATTGATAACGTTTTGCTTGGCAATGGATTAATGATTTCGGGGAAGTCAATAAATGGGTTTGCATCAAATGGGACAAAGATTCCATTGATCCATGGAAAGTTTGCTTCAAGTCCAACATGTCCATCAGAGAAAGATGCCGAATTTTGTTTTTGTTTGGACCCCAAACGCATAAAGGGAAAAATTGTCTTGTGTAGAACTTCATTTGGTTATTCAGCGGGTCTTGAATCGGGTGCATTTGGCTCAATTTCAATCTCTTACGAATATGAAGCTCAAGTAGTTTCTTATCCTGCAGTAGGCATAGATCCAGAGGTTTATGATGTTGTTTTGTCTTACGCAAATTCCACTACCACCCCTAGTGCTGAAATACTGAGTAGTGCAGGCTTTATAAACAATAGTGCTCCAATTGTTGCTGAATTCTCTTCTGTAGGACCCAATATGCAAATCAAAGAAATTATGAAGCCAGACATAAGTGCTCCGGGTATAGAAATTTTGGCTGCTTACTCACCTCTTGCACCACCTTCTCCTGATAAAAGAGATAAAAGATCTGTGAAATACAACATACTCTCTGGAACCTCAATGTCATGCCCCCATGTTGCTGGTGCAGCTGCATATGTTAAGACTTTTCATCCTGATTGGTCTCCGGCAGCTATAAAGTCTTCTCTTATGACCACTGCAAAACCAATGAATGGAAGTGAACTCGCAGAATTCTCCTATGGATCAGGGTTTTTGGACCCAGTTAGAGCCATAAATCCTGGTCTAGTTTTTGATGCTTCCAAAGATGACTATGTGAATTTGCTTTGCAGAATTGGGTATGATACAATGAAAGTTCGAAAAATCTCAGGAGACAAAAGTGTTTGCTCTTCATCATCTCTGCCAATGGCAAAAGATTTTAATTATCCTGCAATTGTGGCTGAGATTGAACCAATGAAACCATTCATGATTAATTTCACAAGAACAGTTACAAATGTTGGATTTGCTAACTCTACCTATAAGGCTTGCATCCAACAACATTCTGGCATCAACATCACTGTTGTGCCTGACATACTTAAGTTTAAATGTCTCAAGGAGAAACAATCTTTTGTTGTTCATGTTGTTGGAGGGAAATTTAGTGACTCTAGTTTAGTTTCATCGTCACTGTCGTGGACCGATGGAACTCATAGTGTAAGGTGTCCACTTATTTTACGTGTTATAAAAGTAGGAGCATGA 1761 0.4003 MGFKESIHRNKTGESDVIIGVIDTGIWPESESFNDHGFGPIPKKWKGACKGGKNFRCNKKIIGARYYLKDQPSTRDIVGHGSHTASIAAGNKVVGASFYGIAEGVARGGVPSARIAAYSVCSEQGCTDDAILAAFDDAIADGVDLITISIGADEQMTFDKDIIAIGSFHAMEKGILTIHSADRRIIDNVLLGNGLMISGKSINGFASNGTKIPLIHGKFASSPTCPSEKDAEFCFCLDPKRIKGKIVLCRTSFGYSAGLESGAFGSISISYEYEAQVVSYPAVGIDPEVYDVVLSYANSTTTPSAEILSSAGFINNSAPIVAEFSSVGPNMQIKEIMKPDISAPGIEILAAYSPLAPPSPDKRDKRSVKYNILSGTSMSCPHVAGAAAYVKTFHPDWSPAAIKSSLMTTAKPMNGSELAEFSYGSGFLDPVRAINPGLVFDASKDDYVNLLCRIGYDTMKVRKISGDKSVCSSSSLPMAKDFNYPAIVAEIEPMKPFMINFTRTVTNVGFANSTYKACIQQHSGINITVVPDILKFKCLKEKQSFVVHVVGGKFSDSSLVSSSLSWTDGTHSVRCPLILRVIKVGA* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3665 586 Gene3D - 182 314 - -
Amo16g3665 586 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 180 581 IPR045051 -
Amo16g3665 586 SUPERFAMILY Subtilisin-like 8 435 IPR036852 GO:0004252|GO:0006508
Amo16g3665 586 CDD Peptidases_S8_3 11 410 IPR034197 -
Amo16g3665 586 Pfam Subtilase family 15 426 IPR000209 GO:0006508|GO:0008236
Amo16g3665 586 Gene3D Peptidase S8/S53 domain 16 180 IPR036852 GO:0004252|GO:0006508
Amo16g3665 586 ProSiteProfiles Serine proteases, subtilase domain profile. 1 434 - -
Amo16g3665 586 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 180 581 - -
Amo16g3665 586 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 1 181 - -
Amo16g3665 586 PRINTS Subtilisin serine protease family (S8) signature 14 33 IPR015500 -
Amo16g3665 586 PRINTS Subtilisin serine protease family (S8) signature 374 390 IPR015500 -
Amo16g3665 586 PRINTS Subtilisin serine protease family (S8) signature 76 89 IPR015500 -
Amo16g3665 586 Gene3D - 451 582 - -
Amo16g3665 586 Gene3D Peptidase S8/S53 domain 181 447 IPR036852 GO:0004252|GO:0006508
Amo16g3665 586 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 181 IPR045051 -
Amo16g3665 586 CDD PA_subtilisin_like 188 307 - -
Amo16g3665 586 Pfam Fibronectin type-III domain 481 578 IPR041469 -
Amo16g3665 586 ProSitePatterns Serine proteases, subtilase family, serine active site. 375 385 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3665 Amo-Chr16 147487930 147489762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3665 1 579 Subtilisin-like Serine Gene Family AT3G46850 52.335 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3665 - - cit:102615548 625.165