Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3652 ATGTTTTCCAAACACAATGCTCCAAAACCACAAGATCCAAGGCTCAAGGCCATCACTGAAGCCATCAGAGTCGTTCCTCACTTCCCCAAACAAGGGATAATGTTTCAGGACATAACGACATTGTTGTTGGATCATAAGGTTTTTAAGGACACAATTGACATTTTTGTTGATCGTTACAAAGACATGGGAATTTCCATTGTTGCCGGAGTGGAAGCTAGGGGATTCTTTTTTGGCCCCTCAATAGCATTAGCCATTGGTTCAAAGTTTGTTCCTTTGCGCAAACCTCGAAAGCTACCAGGTGAAGTAATATCAGAAAAATATGATCTAGAATATGGAAGTGATTGTTTGGAGATGCATGTTGGTGCTGTGAAACATGGTGACAAAGCCATTGTTATTGATGATTTGGTGGCTACAGGTGGAACTCTATCTGCAGCAATTACTCTCCTAGAACGTGGTGGTGCTGAAGTAGTGGAATGTGCTTGTATCATTGGTCTGTCTCATTTTAAGGATGATTGCAGCGTGAATGGCAAACCACTTTATTTCCTTGTGGAACCGCGTCTTCAATAA 567 0.4162 MFSKHNAPKPQDPRLKAITEAIRVVPHFPKQGIMFQDITTLLLDHKVFKDTIDIFVDRYKDMGISIVAGVEARGFFFGPSIALAIGSKFVPLRKPRKLPGEVISEKYDLEYGSDCLEMHVGAVKHGDKAIVIDDLVATGGTLSAAITLLERGGAEVVECACIIGLSHFKDDCSVNGKPLYFLVEPRLQ* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3652 188 CDD PRTases_typeI 52 184 IPR000836 -
Amo16g3652 188 Gene3D - 6 184 IPR029057 -
Amo16g3652 188 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 186 - -
Amo16g3652 188 Hamap Adenine phosphoribosyltransferase [apt]. 18 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Amo16g3652 188 SUPERFAMILY PRTase-like 22 165 IPR029057 -
Amo16g3652 188 Pfam Phosphoribosyl transferase domain 58 163 IPR000836 -
Amo16g3652 188 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 2 186 - -
Amo16g3652 188 TIGRFAM apt: adenine phosphoribosyltransferase 19 178 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3652 Amo-Chr16 147311194 147315240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3652 11 184 PRT Gene Family AT1G27450 67.816 9.62e-85 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3652 K00759 - pop:7468647 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3652 16 147311194 147315240 Amo16g3652 16 147311194 147315240 ECH
Amo16g3652 16 147311194 147315240 Amo18g3455 18 137619470 137623842 ECH
Amo16g3652 16 147311194 147315240 Amo08g2133 08 34185663 34189244 PCT
Amo16g3652 16 147311194 147315240 Amo18g3455 18 137619470 137623842 PCT
Amo08g2133 08 34185663 34189244 Amo16g3652 16 147311194 147315240 PCT
Amo18g3455 18 137619470 137623842 Amo16g3652 16 147311194 147315240 PCT