Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3568 ATGGGGAAAAAAGGAGGCTGGTTTTCGTCAGTAAAGAAAGTTTTCAAGTCGTCGTCCTCGTCATCCTCTTCTTCTAATAAGAATTTGTTGCCGGCTCCGGCGCCTGCCAAAAAGAAGGACAACAACACAGGGAAGAAACAGCAGCACCAAGTACCAGCAGCAGCAGAAGTTGTGCCTTTTGAGCGGTTTCAAGCAGAGACTTCACCAAATGTGATAACTGAGGAGAGTGCCACGTCATCAGCGTTTGGGGCTGAAGACAGGAATCATGCTATTGCGGTTGCGGCAGCAACTGCAGCGGCTGCGGAGGCAGCGGTTGTGGCTGCTCAGGCTGCCGCTAGAGTTGTGAGACTGGCGGGTTATGGGCGGCAGTCCAAGGAAGAGAGAGCGGCAACAGTGATTCAGTCATACTACAGGGGTTACCTGGCTCGACGCGCTTTGCGTGCATTAAAGGGACTTGTGAGGTTGCAAGCGCTGGTGAGGGGACACAATGTGCGGAAGCAAGCTCAGATGACAATGCGGTGTATGCAAGCATTAGTGAGGGTGCAAGCACGAGTGAGAGCTCGCAGGATTCAGCTCAATCATGAGAAGCATCTTCATCATCATGAAGSAGATGATGATATTGATGATGAGCAAWAAGTACAAGTTCATCCGAAGCAAGTTGCCAATAATAATAAGCCTATCATGATGAGCCYCATGAGAAATAGTGATGGTTGGGACAATAGGCATCAAAGTAGCMACAAGGTTAGGGAAAATGATTTGAGGAAACATGATACTGCAATGAAGAGGGAGAGAGCTCTTGCTTATGCTTTCAACTCCCAGCAGCAACCACATAATCAATACATGCAAACAGCTCCAAATAGTGATGACATGGGAACTTATTATCCCAATGAGCGTGAAAAAGCCCAATGGGGTTGGAACTGGTTAGAGCGTTGGATGTCATCTCAACCGCACAATGTTAAGCACCTGAGCCCACGTGAGACCCCTTATATGAATCTTGCTTCAACAACCTCAACTACAACAGATAACATGTCTGAGAAAACCGTAGAAATGGACAAGATTGCAACTCCAGGCCCAAGTAATAATCTCAACATGGGCCCAATGAACCAAGACTTTGTTGACCAAAGCCCAATTCTAAGTAGACAACATCAAAGACCTCCAAGCCCAAGTAGACCCAGCTATATGGCACCAACTCAGTCTGCAAAGGCCAAGGTTCGGGATCAAGGCCCAAGCAAACCACGGGCCTCACCTGGGCCACAGTGGAACTCATCGACAAAGGGAGGTTCTGTTACGGGTTCAGGCTGTGACTCGTCTAGCTCCGGTGGAACAACAAGTTACCAATATACCAGGAGCCCAAGCCCAAAGATTAATGGGTTTCGTCCTCAATCTAGAAGGATAGTTAGCAGCAACCCAGATTACATTGAAGACTGGGCCATTCAACTTGGAACTCATGGTTGGGCATAG 1461 0.4805 MGKKGGWFSSVKKVFKSSSSSSSSSNKNLLPAPAPAKKKDNNTGKKQQHQVPAAAEVVPFERFQAETSPNVITEESATSSAFGAEDRNHAIAVAAATAAAAEAAVVAAQAAARVVRLAGYGRQSKEERAATVIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRIQLNHEKHLHHHEXDDDIDDEQXVQVHPKQVANNNKPIMMSXMRNSDGWDNRHQSSXKVRENDLRKHDTAMKRERALAYAFNSQQQPHNQYMQTAPNSDDMGTYYPNEREKAQWGWNWLERWMSSQPHNVKHLSPRETPYMNLASTTSTTTDNMSEKTVEMDKIATPGPSNNLNMGPMNQDFVDQSPILSRQHQRPPSPSRPSYMAPTQSAKAKVRDQGPSKPRASPGPQWNSSTKGGSVTGSGCDSSSSGGTTSYQYTRSPSPKINGFRPQSRRIVSSNPDYIEDWAIQLGTHGWA* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3568 486 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Amo16g3568 486 MobiDBLite consensus disorder prediction 414 463 - -
Amo16g3568 486 MobiDBLite consensus disorder prediction 17 53 - -
Amo16g3568 486 Gene3D - 126 168 - -
Amo16g3568 486 Pfam IQ calmodulin-binding motif 153 168 IPR000048 GO:0005515
Amo16g3568 486 Pfam IQ calmodulin-binding motif 127 147 IPR000048 GO:0005515
Amo16g3568 486 PANTHER IQ-DOMAIN 21 1 458 - -
Amo16g3568 486 SMART iq_5 125 147 IPR000048 GO:0005515
Amo16g3568 486 SMART iq_5 148 169 IPR000048 GO:0005515
Amo16g3568 486 MobiDBLite consensus disorder prediction 354 396 - -
Amo16g3568 486 MobiDBLite consensus disorder prediction 352 463 - -
Amo16g3568 486 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Amo16g3568 486 PANTHER IQ-DOMAIN 5-RELATED 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3568 Amo-Chr16 145860878 145866231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3568 1 454 IQD Protein Family AT3G49260 48.025 7.83e-92 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3568 - - adu:107495204 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3568 16 145860878 145866231 Amo16g3568 16 145860878 145866231 ECH