Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3529 ATGGTATGCAGCAGTTGTGTAAGGTCTTTGGTTGTTCAAGCTGGAACCTTTGCCAAACGAGTGAGAATAAACAACACTAGGAAGAGTTTGCTAGCTGTCCCTAGTATTTCTTATTCTCCTATTCGTCAATTTAAGACATTCACAGTGATGATGGTGGATACGGGTTCCGTGTCAAGAAGTGCTGGTTCCCTTGTGGATATGATGCCAGAGAAAGATGATGATGGCCGGTTTGCAAGTGGAGGGTGGAAAAGTGAGGATGGAAGGCTGAGCTGTGGGTATTCAAGCTTCAGAGGGAAGAGAGTAACGATGGAGGATTTTTATGATATTAAAACATTGAAGATTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAAATTTTTTACTGATGCCAAATTGGCTATAAGTGAAACGTATCAAGGGACTGATTCTCAATTTCTGGATTCTGAAAAAGACACTTTCCGGGATGATGGCTCTACTGCTTCAACCGCTGTTTTAATTGATAACCATCTCTATGTTGCTAATGTTGGAGATTCTAGAACTATAATATCGAAGGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAACAGAAGTGATGAACGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGTGTCCTAGCAATGTCTCGCGCCTTTGGCAATCGTATGTTGAAGCAGTTTGTTGTTGCAGAACCTGAGATCCAGGACCAGGAGATAGATGAACAAACTGAATTGCTGATTCTTGCAAGTGATGGACTTTGGGATGTAGTACCAAATGATGATGCCATCGCTCTTGCTTGCACAGAAGAGGAGCCTGAGGCAGCTGCTCGTAAGTTAACAGAAGCAGCATTTTCTCGTGGCAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGACAGAGCAGAACCCATTGGTACTGACAAAGTAGATGCCATTGTTCCTGACAAAGTAGATACTGCTGTTCCTAACAAAGTAGAAGTGGCATCAGCTAGTGTCAAGCAAGAGAGGAACAAAGCAGATGCCACTGTTCCTGACAGAGCAGAAGCGGCATCAGCTAGTGTCAAGCAAGGGGAGTCTACTTGA 1203 0.4372 MVCSSCVRSLVVQAGTFAKRVRINNTRKSLLAVPSISYSPIRQFKTFTVMMVDTGSVSRSAGSLVDMMPEKDDDGRFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTLKIGGHSVCLFGIFDGHGGSRAAEYLKEHLFDNLMKHPKFFTDAKLAISETYQGTDSQFLDSEKDTFRDDGSTASTAVLIDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEIDEQTELLILASDGLWDVVPNDDAIALACTEEEPEAAARKLTEAAFSRGSADNITCIVVRFHHDRAEPIGTDKVDAIVPDKVDTAVPNKVEVASASVKQERNKADATVPDRAEAASASVKQGEST* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3529 400 MobiDBLite consensus disorder prediction 368 400 - -
Amo16g3529 400 Gene3D - 81 361 IPR036457 -
Amo16g3529 400 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 43 348 - -
Amo16g3529 400 SUPERFAMILY PP2C-like 86 337 IPR036457 -
Amo16g3529 400 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Amo16g3529 400 PANTHER ALPHABET, ISOFORM E-RELATED 43 348 - -
Amo16g3529 400 SMART PP2C_SIG_2 88 336 IPR001932 -
Amo16g3529 400 CDD PP2Cc 90 336 IPR001932 -
Amo16g3529 400 Pfam Protein phosphatase 2C 92 329 IPR001932 -
Amo16g3529 400 ProSiteProfiles PPM-type phosphatase domain profile. 90 336 IPR001932 -
Amo16g3529 400 SMART PP2C_4 80 334 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3529 Amo-Chr16 145146718 145153330 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3529 1 342 PP2C-type Phosphatase Gene Family AT5G53140 71.186 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3529 K17506 - gmx:100805795 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3529 16 145146718 145153330 Amo16g3529 16 145146718 145153330 ECH