Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3522 ATGCTCTCTCAGATCTCACAACCATCCTTTAAATTCTTCTTCATTTCCCCACTAGCGCCGTTTTCCAATACTGCATCTCTTTTTTTTTTTCTTCTTCCTTCTTCTCTTGTCTTTGTCTTTGGTCTTTTTGTCCTCTCATTATTGCATGCAAACAACGGAACGACGATGAAGGATCCAAAACGACTCTCGCCGCGGCGGATCACTTTTCGGCGAGTTGTCGGCGATTCAGACGGTACCATCACGAGCTTCAAGAATGCTCGCCGGAGGAGGCTCAGAATCCGGCGAATGAAGTACACCTGCGAGGCCAAGATCCACGTCGAGAATGGAGGTTCCCCGGCGGCGGATGCTGATGCGGAGGTTGTTGATTCTGATAGCAAGCGGAGTGAGATTCACGAATCCATGGAAATATCACTGTCGCTGTCGTCAACGTCATCTGAGGAGGAGGATCGGCCGTCGGTCGGGGAAAACTTCGGTGGCGTATTGTCGTACGGTTCGGTGTCGGTTATTGGAAACAGGAAGGAGATGGAGGATGCGGTGAGCGTGGAGATAGGCTTTGTTGGGAAGGAGAATTCGAAGTGCGACTTCTTCGCGGTGTTTGATGGTCACGGCGGAGCTCAGGTGGCGCAGGTGTGCCGGGAGCGGCTGCACCGGCTGGTGGCGGAGGAGGTAGAGAGGAGAAATGAGAAGGTCGAGTGGGATTGGGAGGGTGTGATGGAAGGCTGTTTCCGTAAAATGGACGGAGAGGTTGCGGGAAATGCGGCGGTGAGAACGGTGGGTTCTACGGCGGTTGTAGCCGTCGTGGCAACGGAGGAAGTCGTCGTCGCAAATTGCGGTGATTGTAGGGCCGTGTTGGGAAGAGATGGCGAGGCCGTTGATTTGTCTAGTGATCATAAGCCCGACAGGCCTGATGAGTTGATGCGAATCGAAGAGGCTGGTGGAAGGGTCATAAACTGGAATGGCCAGCGCGTTCTAGGTGTTCTTGCCACTTCGCGATCTATAGGGGACCAATACCTTAGGCCATATGTAATATCAAAACCAGAAGTCACTGTGACAAAGCGAACCAACAAAGATGAATTCCTTATACTAGCAAGTGATGGCTTGTGGGATGTGATCTCCAGCGAAGCAGCATGCCAGGTTGTAAGGAGAAGCCTCAACGGCCAGATTAAGAGAGTTTCCAATGGAGTTGGGAGGCAAAGCTGCGCCACCGAGGCTGCGGCACTCTTGGTTGAGATAGCAATGGCAAAGGGAAGCAGAGATAACACCAGTGTCATCGTCGTGGAGCTAAGCAGAACATCTTCGTCCAGCTGA 1308 0.5245 MLSQISQPSFKFFFISPLAPFSNTASLFFFLLPSSLVFVFGLFVLSLLHANNGTTMKDPKRLSPRRITFRRVVGDSDGTITSFKNARRRRLRIRRMKYTCEAKIHVENGGSPAADADAEVVDSDSKRSEIHESMEISLSLSSTSSEEEDRPSVGENFGGVLSYGSVSVIGNRKEMEDAVSVEIGFVGKENSKCDFFAVFDGHGGAQVAQVCRERLHRLVAEEVERRNEKVEWDWEGVMEGCFRKMDGEVAGNAAVRTVGSTAVVAVVATEEVVVANCGDCRAVLGRDGEAVDLSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNKDEFLILASDGLWDVISSEAACQVVRRSLNGQIKRVSNGVGRQSCATEAAALLVEIAMAKGSRDNTSVIVVELSRTSSSS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3522 435 MobiDBLite consensus disorder prediction 119 133 - -
Amo16g3522 435 Gene3D - 157 434 IPR036457 -
Amo16g3522 435 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 97 431 - -
Amo16g3522 435 PANTHER ALPHABET, ISOFORM E-RELATED 97 431 - -
Amo16g3522 435 SUPERFAMILY PP2C-like 158 429 IPR036457 -
Amo16g3522 435 ProSiteProfiles PPM-type phosphatase domain profile. 162 428 IPR001932 -
Amo16g3522 435 SMART PP2C_SIG_2 176 428 IPR001932 -
Amo16g3522 435 CDD PP2Cc 162 428 IPR001932 -
Amo16g3522 435 Pfam Protein phosphatase 2C 163 421 IPR001932 -
Amo16g3522 435 MobiDBLite consensus disorder prediction 111 153 - -
Amo16g3522 435 SMART PP2C_4 152 426 IPR001932 -
Amo16g3522 435 ProSitePatterns PPM-type phosphatase domain signature. 195 203 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3522 Amo-Chr16 145008403 145012629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3522 163 430 PP2C-type Phosphatase Gene Family AT2G29380 51.736 2.31e-89 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3522 K14497 - gmx:100807235 487.648