Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3481 ATGGCATCGAGTTCAATGTCATCTTCAGGGTCATGGAGTGCTAAGGACAATAAGGCCTTTGAAAGGGCATTGGCCGTTTATGATAAGGACACTCCTGACCGTTGGTACAATGTTGCTCGCGCCGTCGGCGGAAAAACTCCCGACGAAGTTAAGCGCCACTACGAACTTCTCCTCCGAGATGTTAAGTCTATTGAATCAGGGCAAGTGCCATTTCCAAAATACAAGAAAACTGGAGGCATTGGCAAATTAAGGATTTGTGACTTTCACTACAAATTAAAGCAGCATTATTTCGTTCTATAG 300 0.4433 MASSSMSSSGSWSAKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPDEVKRHYELLLRDVKSIESGQVPFPKYKKTGGIGKLRICDFHYKLKQHYFVL* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3481 99 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Amo16g3481 99 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 79 - -
Amo16g3481 99 CDD SANT 18 58 IPR001005 -
Amo16g3481 99 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Amo16g3481 99 Gene3D - 2 71 - -
Amo16g3481 99 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Amo16g3481 99 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Amo16g3481 99 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3481 Amo-Chr16 144120893 144122598 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo16g3481 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3481 - - vra:106761815 142.895