Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3479 ATGAAGGATCCAAAACGACTCTCGCCGCGGCGGATCACTTTTCGGCGAGTTGTCGGCGATTCAGACGGTACCATCACGAGCTTCAAGAATGCTCGCCGGAGGAGGCTCAGAATCCGGCGAATGAAGTACACCTGCGAGGCCAAGATCCACGTCGAGAATGGAGGTTCCCCGGCGGCGGATGCTGATGTGGTGGTTGTTGATTCTGACAGCAAGCGGAGTGAGATTCACGAATCCATGGAAATATCGCTGTCGCTGTCGTCAACGTCATCTGAGGAGGAGGATCGGCCGTCGGTGGGGGAAAACTCCGGTGGCGTATTGTCGTACGGTTCGGTGTCGGTTATCGGAAACAGGAAGGACATGGAGGATGCGGTGAGCGTGGAGATAGGCTTTGTTGGGAAGGAGAATTCGAAGTGCGACTTCTTCGCGGTGTTTGATGGCCACGGCGGAGCTCAGGTGGCGCAGGTGTGCCGGGAGCGGCTGCACCGGCTGGTGGCGGAGGAGGTAGAGAGGAGAAATGAGAAGGTCGAGTGGGATTGGGAGGGTGTGATGGAAGGCTGTTTCCGTAAAATGGACGGAGAGGTTGCGGGAAATGCGGCGGTGAGAACGGTGGGTTCTACGGCGGTTGTAGCCGTCGTGGCGACGGAGGAAGTCGTCGTCGCAAATTGCGGTGATTGTAGGGCCGTGTTGGGAAGAGATGGCGAGGCCGTCGATTTGTCTAGTGATCATAAGCCCGACAGGCCTGATGAGTTGATGCGAATCGAAGAGGCTGGTGGAAGGGTCATAAACTGGAATGGCCAGCGCGTTCTAGGTGTTCTTGCCACTTCGCGATCTATAGGGGACCAATACCTTAGGCCATATGTAATATCAAAACCAGAAGTCACTGTGACAAAGCGAACCAACAAAGATGAATTCCTTATACTAGCAAGTGATGGCTTGTGGGATGTGATCTCCAGCGAAGCAGCATGCCAGGTTGTAAGGAGAAGCCTCAACGGCCAGATTAAGAGAGTTTCCAATGGAGTTGGGAGGCAAAGCTGCGCCACCGAGGCTGCGGCACTCTTGGTTGAGATAGCAATGGCAAAGGGAAGCAGAGATAACACCAGTGTCATCGTCGTGGAGCTAAGCAGAACATCTTCGTCCAGCTGA 1143 0.5486 MKDPKRLSPRRITFRRVVGDSDGTITSFKNARRRRLRIRRMKYTCEAKIHVENGGSPAADADVVVVDSDSKRSEIHESMEISLSLSSTSSEEEDRPSVGENSGGVLSYGSVSVIGNRKDMEDAVSVEIGFVGKENSKCDFFAVFDGHGGAQVAQVCRERLHRLVAEEVERRNEKVEWDWEGVMEGCFRKMDGEVAGNAAVRTVGSTAVVAVVATEEVVVANCGDCRAVLGRDGEAVDLSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNKDEFLILASDGLWDVISSEAACQVVRRSLNGQIKRVSNGVGRQSCATEAAALLVEIAMAKGSRDNTSVIVVELSRTSSSS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3479 380 ProSitePatterns PPM-type phosphatase domain signature. 140 148 IPR000222 GO:0043169
Amo16g3479 380 ProSiteProfiles PPM-type phosphatase domain profile. 107 373 IPR001932 -
Amo16g3479 380 CDD PP2Cc 107 373 IPR001932 -
Amo16g3479 380 SMART PP2C_4 97 371 IPR001932 -
Amo16g3479 380 PANTHER ALPHABET, ISOFORM E-RELATED 71 374 - -
Amo16g3479 380 SMART PP2C_SIG_2 121 373 IPR001932 -
Amo16g3479 380 SUPERFAMILY PP2C-like 104 374 IPR036457 -
Amo16g3479 380 Gene3D - 102 379 IPR036457 -
Amo16g3479 380 MobiDBLite consensus disorder prediction 75 103 - -
Amo16g3479 380 Pfam Protein phosphatase 2C 108 366 IPR001932 -
Amo16g3479 380 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 71 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3479 Amo-Chr16 144047924 144052049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3479 108 375 PP2C-type Phosphatase Gene Family AT1G07430 49.371 2.62e-90 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3479 K14497 - gmx:100807235 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3479 16 144047924 144052049 Amo16g3479 16 144047924 144052049 ECH