Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3413 ATGGCAAAAATAACTCATATAGCAGCAATCTCAATTCCAGCGTTTAGCCATCAAGCTTCCATTCTCGAGTTTTGCAAGAGACTCGTTCATCTCCATCACAACATCCATGTTACCTGCATCTTCCCCACCATTGATTCACCTCCTCCCGCCACCATCTCCCTCCTCCAATCTCTTCCTTCTTCCACCACCGTTGACCACATTTTCCTCCCTCCAATCAACAAGCAAGACTTACCCCAAGATGTTCCCCCCGCCGTTCAAATCCAACTCGCAGTGTCCCAATCCATGCCTTCTTTCCGTGCCACGCTGCACCAACTGCATTCAACCACTCCCTTTGTTGCTTTGGTGGCAGATACTTTCGCAAGCGAAGCTCTCCAAGTAGCAAAAGATATCAGCCTCAACCTCTCAGCTTACATTTACTTCCCTCCTTCCGCCATGACGCTTTCATTGTTCTTGCATCTGAAAACTTTGCACAACCAAGTTTCGTGTGAATACAGAGATCACAAAGAACTCATTCGTATTCCAGGTTGCATCCCGATCTACGGTCACGATCTCCCTGAGCATTTTCGTGATAGATCCAGCATCTCTTACGATCTCATTCTTAGATTGTCCAAGAGGTTGTTGTCTCTTGCTGATGGTTTCTTGGTTAACAGCTTCTCAGAGATCGAGCGAGTAACCGCCATAGCCATAGAAGAAGAACACGGAAAGAAGAACACTCCTGTTTATCTTGTTGGGCCAATAATACAAACTGGGCCCAATAGTGACCCAAATGGGCCTGAGTGTGTGCGGTGGCTTGATAACCAAAGGCCCAATTCTGTTTTGTATGTTTCGTTTGGAAGCGGAGGCACTCTGTGTCAAGAACAGGTCAATGAGATGGCTTTGGGTTTGGAGCTAAGCGGTCAAAAGTTTTTATGGGTTTTGAGAGCGCCGAGTGATTCGGCTAATGCGGCTTATCTCGGTGCTGAAAACGTTGACCCTTTGAGTTTCTTGCCACGTGGCTTTCTGGAGAGAACCAAAGGACAAGGGTTGGTTCTTGTTAATTGGGCCCCACAGACACAGATCCTTAGTCACAGTTCAACTGGTGGATTCCTTACACACTGTGGTTGGAATTCTACACTCGAGAGCATTGTGATGGGAGTGCCAATGATAACTTGGCCATTGTTTGCCGAGCAAAGAATGAATGCTGTTTTGTTAACTGAAGGCCTCAAAGTGGGTCTGAGGCCCAAGTTTAATAGCGATGGCATTGTAGAAAGAGATGAGATTGCTATGGTGGTAAAGGGTTTAATGGTTGGTGAAGAAACAAATGGGATTCGACAAAGAATTCGTGAGCTCAAAGATGCTGCGGCAGATGCATTGAAGGAAGATGGGTCATCTACAAGGGATCTTTTCCAATTCGGAACTCGGTTGGAGAACCTTAAAAGAGGTCATCAGACATTTGATGGGTTAATAACTTCGTGA 1455 0.4612 MAKITHIAAISIPAFSHQASILEFCKRLVHLHHNIHVTCIFPTIDSPPPATISLLQSLPSSTTVDHIFLPPINKQDLPQDVPPAVQIQLAVSQSMPSFRATLHQLHSTTPFVALVADTFASEALQVAKDISLNLSAYIYFPPSAMTLSLFLHLKTLHNQVSCEYRDHKELIRIPGCIPIYGHDLPEHFRDRSSISYDLILRLSKRLLSLADGFLVNSFSEIERVTAIAIEEEHGKKNTPVYLVGPIIQTGPNSDPNGPECVRWLDNQRPNSVLYVSFGSGGTLCQEQVNEMALGLELSGQKFLWVLRAPSDSANAAYLGAENVDPLSFLPRGFLERTKGQGLVLVNWAPQTQILSHSSTGGFLTHCGWNSTLESIVMGVPMITWPLFAEQRMNAVLLTEGLKVGLRPKFNSDGIVERDEIAMVVKGLMVGEETNGIRQRIRELKDAAADALKEDGSSTRDLFQFGTRLENLKRGHQTFDGLITS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3413 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 462 - -
Amo16g3413 484 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 254 397 IPR002213 GO:0008194
Amo16g3413 484 Gene3D Glycogen Phosphorylase B; 6 457 - -
Amo16g3413 484 PANTHER GLYCOSYLTRANSFERASE 4 471 - -
Amo16g3413 484 CDD GT1_Gtf-like 6 450 IPR002213 GO:0008194
Amo16g3413 484 Gene3D Glycogen Phosphorylase B; 258 452 - -
Amo16g3413 484 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Amo16g3413 484 PANTHER GLYCOSYLTRANSFERASE 4 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3413 Amo-Chr16 142516377 142518028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3413 6 473 Glycosyltransferase AT1G01420 45.551 4.93e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3413 K08237 - gmx:100776809 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3413 16 142516377 142518028 Amo06g2666 06 90554981 90558350 hybridization