Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3411 ATGGCAGAGTCAGGGAGGTATTGTTACAGGGAAGTAGTTCCATTCTGTGCAATGGTTGCAGTTGAGTGTACCAACGTGGGTGTCAACGTTCTTTTCAAGCAAGCCACTCTCAAGGGATTCAGTTACTATGCCTTCATCGTTTATTCTTTCGCTCTCTCCACTCTTTTTCTTTTTCTCCCTCTCCCCTTCGTCTTCCAATGGTCAAGAGGGCTTCCTCCATTCAATGTTTCTCTCGTCTTAAGAATTTTTCTCCTTGGTACCATTGGATTTGTAGCACAGCTGAGTGGATACAAAGGACTTGAATACACTTCACCAACTCTCTTCTCTGCTCTTAGCAACCTTATTCCGGCTTTTACCTTCATCCTTGCAGTCTTTTTCAGGATGGAGAAGATTTCTCCAAAAAGTTGGAGCACTCAGGCCAAAATCTTGGGTTCTTTAGTATCAATATTAGGTGCACTCATAGTTGTTCTCTACAAGGGTCCAACATTGATCACAGCTTCATCATCACCACACCAGTCACCTCATGTAGATTTTCTAAAGGACTCATCACCCCACCAAAATTGGGTTCTTGGAGGCTTCCTTATTGCCATTGAGTTTATTTTGGTTCCAATTTGGTATATTGTTCAGACCAATGTGATCAAAGACTATCCAGCAGAGATTATTGTGGTGTTCTTTTACAACTTGTGTGGGACTCTCATATCTGCACCTGTGTGCTTACTATTAGATGAATCAAACTTAAGTGGTTGGATTATAAAACCAGATATAACATTAGTCGCCATTTTGTACTCTGGATTCTTTTGCACAGGCCTAAGCAGTTTGGTCCATACATGGGGTATCCATATTAAAGGCCCTGTATATATATCAAGTTTCAAGCCTGTGTCTATAGTCATAGCTGCTGCTTTCAGTGTTATATTTCTTGGTGATCCACTATATTTGGGCATTGTTGTTGGAGGAGTAATAATATCAATTGGGTTTTATGCTGTTTTATGGGGTAAAGCAAACGAAGAATTGAGTGAGTACATTGATTCAAGCCAAAGTCAACCCACATCAAAAGTCAACCAGCCTTTGTTACTATAG 1077 0.4058 MAESGRYCYREVVPFCAMVAVECTNVGVNVLFKQATLKGFSYYAFIVYSFALSTLFLFLPLPFVFQWSRGLPPFNVSLVLRIFLLGTIGFVAQLSGYKGLEYTSPTLFSALSNLIPAFTFILAVFFRMEKISPKSWSTQAKILGSLVSILGALIVVLYKGPTLITASSSPHQSPHVDFLKDSSPHQNWVLGGFLIAIEFILVPIWYIVQTNVIKDYPAEIIVVFFYNLCGTLISAPVCLLLDESNLSGWIIKPDITLVAILYSGFFCTGLSSLVHTWGIHIKGPVYISSFKPVSIVIAAAFSVIFLGDPLYLGIVVGGVIISIGFYAVLWGKANEELSEYIDSSQSQPTSKVNQPLLL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3411 358 PANTHER WAT1-RELATED PROTEIN 13 336 - -
Amo16g3411 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 332 - -
Amo16g3411 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Amo16g3411 358 PANTHER WAT1-RELATED PROTEIN 13 336 IPR030184 GO:0016021|GO:0022857
Amo16g3411 358 Pfam EamA-like transporter family 26 156 IPR000620 GO:0016020|GO:0016021
Amo16g3411 358 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3411 Amo-Chr16 142463699 142468826 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3411 1 348 Nodulin-like Gene Family AT5G40240 53.521 4.38e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3411 - - gmx:100805667 486.493