Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3409 ATGGCGAGAAAGTTGTTGAATGATTTGGTTCCTTTGGGTGCCATGGTGAGCATGGAATGCGTGAATGTTGGATTGAACACTCTGTTCAAAGCAGCTACCATGAAAGGCATGAGCTACCATGTCTTTGTTGTTTATGCTTATGCTGTTGCTGCTATTCTGCTTCTTCCTGCTCCCTTCATCTCCTCAAGATCAAGAGTGCTTCCTCCTCTTACTTTGCCAGTTGCAACTAAAATTGCTTTTCTTGGCCTCATCGGATGCTCATCTCAGATAATGGGGTACACAGGAATCAGTTTCAGTTCGCCAACTCTTTCTTCGGCGATCAGCAATTTGGTGCCGGCTTTTACCTTCTTGCTCGCCATCGCTTTCAGGATGGAAAAAGTGGCTCTGAAAAGTTCAAGCAGCCAAGCTAAAGTCTTGGGCACCATAGTATCAATATCAGGAGCATTCGTTGTAACTCTTTACAAAGGACCACCGATCATCATTATTCATGCGCCTTCGTTCTCAATTCAACATCCAATTAACAATCTCAGTTCTGTGGATCAAAGTTGGGCCATCGGCGGCCTTCTACTGATGGCTGAGTATATATTGGTTCCTATGTGGTACATTGTACAAGTGCAAATCATGAAGGTGTACCCTGCTGAACTAACTGTTGTCTTCTATTACAATTTATGCGTAAGCATCATGGCCGCAATTGTTGGCATTTTTACAGAGACAAATCCAGGTGCTTGGAAAATAGGAGTAGATACAGCGTTGGCATCTGTCCTTTGCTCTGGAATTTTCGGATCGTTCTTGAACAATGCTGTCCACACATGGGTATTACGCATAAAGGGACCTGTCTACGTCGCAATGTTCAAGCCACTCTCGATTGTCATAGCTGTAGCCATGGGAGTCATGTTTCTTGGTGATTCTCTTCACCTTGGAAGTCTAATTGGAGCAACAATAATATCAATTGGATTTTACACAGTAATGTGGGGTAAGGCAGCAGAAGAGGTGGATGAAAACATCTCAAACCCGGTGTTACCAACTACAGAGAACAATGTTCCTCTCTTGCAAAGCTATAAAAGTGATTTATCTGAAGAAAAACATTCACTTATATAA 1098 0.4281 MARKLLNDLVPLGAMVSMECVNVGLNTLFKAATMKGMSYHVFVVYAYAVAAILLLPAPFISSRSRVLPPLTLPVATKIAFLGLIGCSSQIMGYTGISFSSPTLSSAISNLVPAFTFLLAIAFRMEKVALKSSSSQAKVLGTIVSISGAFVVTLYKGPPIIIIHAPSFSIQHPINNLSSVDQSWAIGGLLLMAEYILVPMWYIVQVQIMKVYPAELTVVFYYNLCVSIMAAIVGIFTETNPGAWKIGVDTALASVLCSGIFGSFLNNAVHTWVLRIKGPVYVAMFKPLSIVIAVAMGVMFLGDSLHLGSLIGATIISIGFYTVMWGKAAEEVDENISNPVLPTTENNVPLLQSYKSDLSEEKHSLI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3409 365 PANTHER WAT1-RELATED PROTEIN 11 338 IPR030184 GO:0016021|GO:0022857
Amo16g3409 365 PANTHER WAT1-RELATED PROTEIN 11 338 - -
Amo16g3409 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3409 Amo-Chr16 142420447 142424393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3409 1 356 Nodulin-like Gene Family AT3G28050 59.079 1.40e-146 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3409 - - gmx:100814137 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3409 16 142420447 142424393 Amo06g2751 06 92190251 92192676 hybridization