Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3396 TTCTGGGATTCTCCCAAGCTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATATTCTTGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTAAAGGCCCAAGGTCGAGAATTTACAGTAATTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTTAGAAGCAGAGGCTCATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATTGTACGTGTTAGTAAACTCTCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAATAAGATCTGGTAGCTGGGTTGTTACACGTTTTGTAAAGGAACACAGACACCCTCTTGTTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGTTGACAGCAGAGAAAAAAAGGTCTGCCACCTACAAAAGACATCTTGAATTGATACTCAAGCACATTGACGAGTATAACGAGAGCCTATCAAAGAAAATACAGCACATAGTAGACAATGTAAAGAAGATGGTAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATTAGCCACTCTTTAA 723 0.4108 FWDSPKLTRSCSNLERRDILGNTIHQFPDSKSQSFENLQELTAGKVAANLKGPRSRIYSNSPVEPYVGQEFELEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMTDKRENVIRQRAETRVGCKAMIMVRKIRSGSWVVTRFVKEHRHPLVGPGGGRRDFIYEQYPLTAEKKRSATYKRHLELILKHIDEYNESLSKKIQHIVDNVKKMVSKEEQSQLNFQLATL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3396 240 Pfam FAR1 DNA-binding domain 80 166 IPR004330 -
Amo16g3396 240 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 53 230 - -
Amo16g3396 240 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 53 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3396 Amo-Chr16 142253062 142254060 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g3396 FAR1 3e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3396 - - aip:107647603 370.933