Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3379 ATGCATCTGGCTCAGACCTCAGCTAGCAGGGGCGTTGCTAGCCTAACATGTAGGCCACACGTTAGATCTGTTATACCGTACGGACACATTAGAGGAAAGGGCTATCCTCAGAGGTGGAGCCGCCCTAGATACAGAAGTCATTACAGGTTCTATTCCACCAGCCCCTCAATAGATCTTAGTCATTTCAATGTGACGTCCTCCACTGTTGCCGCCGCCACGGCTCGCATCGCACGAGCTCCCTCCGTCGCCCTCATCGCGTTTGCTCCCTTCGTTGCCATCGCTGTACGAGCTCTCTTCGTCGTGCTCTTGTCTTACGAGCTCCTTCTGCGCCGCTCTCGTCGCTGCTTCTTCTCTCCTCGCCGAAGGTTTGTCATCATCTCTTCTCATCACCGAGAAGGTTACGAACCCGTACAAATCCAAAGGAAGAAGAGGATCCTGAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACCAGTTCACCAAGACCCTTGACAAGAACCTAGGTGCGCAGGAAGTCTTGTTTTTAGATAATGAGATTGCCTTRAATGAGGCTATCARTGAAGAAAGAGAGCAAGYCATTKAAGAAATTCAGCAYCAAATTGGTGAAATGATATTGGGTCCAACATTGAGTAGTCTCATGCAGCAACTGCACAAGCAAGATCGCAACTTGCTAAAGCTTCAAAGACTCAAAGATCAAATTCTTCTTTGGTCAGAGGTTTCATTTTCTGTTGGGTCTTGCCTCCTTCCTCATCCAGACAAGTTTTCTGCTGACATCTCTTCCAAGTTGGGAAGTAGTTTCTCTATTGTTCCCTTTGTCATTGTGGTGTCTGTTTGCACCATTCTGACTATGATTGCTACCTTGCCTGTTGCACAGCTTTTCTTCTTTCACATCCTCRTTGTTGAAAAGGMAACTTGGCATTAA 921 0.4712 MHLAQTSASRGVASLTCRPHVRSVIPYGHIRGKGYPQRWSRPRYRSHYRFYSTSPSIDLSHFNVTSSTVAAATARIARAPSVALIAFAPFVAIAVRALFVVLLSYELLLRRSRRCFFSPRRRFVIISSHHREGYEPVQIQRKKRILKQRLKVPPALNQFTKTLDKNLGAQEVLFLDNEIALNEAIXEEREQXIXEIQHQIGEMILGPTLSSLMQQLHKQDRNLLKLQRLKDQILLWSEVSFSVGSCLLPHPDKFSADISSKLGSSFSIVPFVIVVSVCTILTMIATLPVAQLFFFHILXVEKXTWH* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3379 306 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 233 302 - -
Amo16g3379 306 PRINTS Ribosomal protein L7A family signature 129 146 IPR001921 -
Amo16g3379 306 PRINTS Ribosomal protein L7A family signature 149 168 IPR001921 -
Amo16g3379 306 Coils Coil 175 185 - -
Amo16g3379 306 PANTHER PROTEIN S-ACYLTRANSFERASE 22-RELATED 233 302 - -
Amo16g3379 306 Coils Coil 193 193 - -
Amo16g3379 306 Coils Coil 195 195 - -
Amo16g3379 306 Gene3D - 135 225 IPR029064 -
Amo16g3379 306 Coils Coil 209 229 - -
Amo16g3379 306 Coils Coil 187 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3379 Amo-Chr16 141826254 141831249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3379 137 168 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 84.375 7.30e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3379 K20027 - aip:107623210 106.301