Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3377 ATGAAAACTCCTTGTCAGGCATTTTTTGAGAGGAAGAGGAAGATGGCGAGAAAGTTGTTGAATGATTTGGTTCCTTTGGGTGCCATGGTGAGCATGGAATGCGTGAATGTTGGATTGAACACTCTGTTCAAAGCAGCTACCATGAAAGGCATGAGCTACCATGTCTTTGTTGTTTATGCTTATGCGGTTGCTGCTATTCTGCTTCTTCCTGCTCCCTTCATCTCCTCAAGATCAAGAGTGCTTCCTCCTCTTACTTTGCCAGTTGCAACTAAAATTGCTTTTCTTGGCCTCATCGGATGCTCATCTCAGATAATGGGGTACACAGGAATCAGTTTCAGTTCGCCAACTCTTTCTTCGGCGATCAGCAATTTGGTGCCGGCTTTTACCTTCTTGCTCGCCATCGCTTTCAGGATGGAAAAAGTGGCTCTGAAAAGTTCAAGCAGCCAAGCTAAAGTCTTGGGCACCATAGTATCAATATCAGGAGCATTCGTTGTAACTCTTTACAAAGGACCACCGATCATCATTATTCATGCGCCTTCGTTCTCAATTCAACCTCCAATTAACAATCTCAGTTCTGTGGATCAAAGTTGGGCCATCGGCGGCCTTCTACTGATGGCTGAGTATATATTGGTTCCTATGTGGTACATTGTACAAGTGCAAATCATGAAGGTGTACCCTGCTGAACTAACTGTTGTCTTCTATTACAATTTATGCGTAAGCATCATGGCCGCAATTGTTGCCATTTTTACAGAGACAAATCCAGATGCTTGGAAAATAGGAGTAGATACAGCATTGGCATCTGTCCTCTGCTCTGGAATTTTCGGATCGTTCTTGAACAATGCTGTCCACACATGGGTATTACGCATAAAGGGACCTGTCTACGTCGCAATGTTCAAGCCACTCTCGATTGTCATAGCTGTAGCCATGGGAGTCATGTTTCTTGGTGATTCTCTTCACCTTGGAAGTCTAATTGGAGCAACAATAATATCAATTGGATTTTACACAGTAATGTGGGGTAAGGCAGCAGAAGAGGTGGATGAAAACATCTCAAACCCGGTGTTACCAACTACAGAGAACAATGTTCCTCTCTTGCAAAGCTATAAAAGTGATTTATCTGAAGAAAAACATTCACTTATATAA 1140 0.4281 MKTPCQAFFERKRKMARKLLNDLVPLGAMVSMECVNVGLNTLFKAATMKGMSYHVFVVYAYAVAAILLLPAPFISSRSRVLPPLTLPVATKIAFLGLIGCSSQIMGYTGISFSSPTLSSAISNLVPAFTFLLAIAFRMEKVALKSSSSQAKVLGTIVSISGAFVVTLYKGPPIIIIHAPSFSIQPPINNLSSVDQSWAIGGLLLMAEYILVPMWYIVQVQIMKVYPAELTVVFYYNLCVSIMAAIVAIFTETNPDAWKIGVDTALASVLCSGIFGSFLNNAVHTWVLRIKGPVYVAMFKPLSIVIAVAMGVMFLGDSLHLGSLIGATIISIGFYTVMWGKAAEEVDENISNPVLPTTENNVPLLQSYKSDLSEEKHSLI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3377 379 PANTHER WAT1-RELATED PROTEIN 24 352 - -
Amo16g3377 379 Pfam EamA-like transporter family 202 337 IPR000620 GO:0016020|GO:0016021
Amo16g3377 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 261 340 - -
Amo16g3377 379 PANTHER WAT1-RELATED PROTEIN 24 352 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3377 Amo-Chr16 141765225 141770280 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3377 15 370 Nodulin-like Gene Family AT3G28050 58.808 3.03e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3377 - - gmx:100814137 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3377 16 141765225 141770280 Amo16g3377 16 141765225 141770280 ECH