Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3374 ATGGCATCATCAGGTAGATGTTATTGGTACATGAACGTGGTTCCATTGTGTGCAATGGTGGCAGTTGAATGCTTCAGCGTTGTTTCCAGCGTTCTATTCAAAGCAGCCACTCAGAAAGGCTTGAGTCAAGTGGATTGCCCACATTTAAAGCCTCGTTGGTCGGTAGGATTTTTCTTCTTGGAGTTTGTATTTCAACTTATTGGATATAAAGGACTTGAGTTTAGTTCACCTACTCTCGCTTCTGCTCTCAGTAACCTTATTCCCGCTTTTACTTACGTACTCGCTATTTTATTCAGGATGGAAAAAGCAACATTGAAAAGCTCGAGCACTCAGGCCAAAATAATAGGTTCAATTATATCAATCATTGGTGCCCTTGTAGTAACTCTCTACAAGGGCCCTGTTGTGTTATCTGCTTCTTCTTCATCATCACTACTCAGCTCATCGTCTTCACAAGGGGATTGGGTTCTTGGGGCCTTCTTACTTGCTGCTTCATACACTTTACCTCCACTTTGGTATATTGTACAGACGCAAGTTATGGAACAATATCCGGTAGAACTTATTGTGGTGTTTTTATACAACTTGTGCGGGACTCTTATATCTGCCCCAGCATGCTTACTTGTTGAATCAAGCTTCAGTGTTTGGAGGCTAAAACTTGACATAACATTATTGGCGGTTATATTCTCAGGATTTTGTGGGTGCATGGTGAGTGTGGTTCATACATGGGCAATACATCTTAAAGGCCCTGTTTATGTATCAATTTTCAAGCCACTATCAGTTGTCATAGCTGCTGCAATGAGTTGTTATTGGAGCGGGGATACTATCAATTGGATTTTATGCTGTTTTATGGGGAAAAGCAAAATCTTGAGTGTACCAACGTCGGTGTCAACGTTCTTTTCAAACAAGCTACTCTCAAGGGATTCAGTTACTACGCATTCATCATTTGTAGCACAACTGAGTGGATACAAAGGACTTGAATACACTTCACCAACTCTCTTCTCTGCTCTTAGCAACCTTATTCCGGCTTTTACCTTCATCCTTGCGGTGTTTTTCAGGATGGAGAAGATTTCTCCAAAAAGTTGGAGCACTCAGGCCAAAATCGTGGGTTCTTTAGTGTCAATATTAGGTGCACTCATAGTTGTTCTCTACAAGGGTCCAACATTGATCTCAGCTTCATCATCACCACACCAGTCACCTCATGTTGATTTTCTAAAGGACTCATCACCGCAGCAAAATTGGGTTCTTGGAGGCTTCCTTATTGCCATTGAGTTTATTCTGGTTCCAATTTGGTATATTGTTCAGACCAATGTGATCAAAGACTATCCAGCCGAGATTATTGTGGTGTTCTTTTACAACTTGTGTGGGACTCTCATATCTGCACCTGTGTGCTTACTATTAGATGAATCAAACTTAAGTGGTTGGATTATAAAACCAGATATAACATTAGTCGCCATTTTGTACTCTGGATTCTTTTGCACAGGCCTAAGCAGTTTGGTCCATACATGGGGTATCCATATTAAAGGCCCTGTATACGTATCAAGTTTCAAGCCTGTGTCTATAGGCATAGCTGCTGCTTTCAGTGCTATATTTCTTGGTGATGCACTATATTTGGGCATTGTTGTTGGAGGAGTAATAATATCAATTGGGTTTTATGCTGTTTTATGGGGRAAAGCAAACGAAGAATTGAGTGAGTACATTGATTCAAGCCAAAGTCAACCCACATCAAAAGTCAACCAGCCTTTGTTATTATAG 1749 0.4071 MASSGRCYWYMNVVPLCAMVAVECFSVVSSVLFKAATQKGLSQVDCPHLKPRWSVGFFFLEFVFQLIGYKGLEFSSPTLASALSNLIPAFTYVLAILFRMEKATLKSSSTQAKIIGSIISIIGALVVTLYKGPVVLSASSSSSLLSSSSSQGDWVLGAFLLAASYTLPPLWYIVQTQVMEQYPVELIVVFLYNLCGTLISAPACLLVESSFSVWRLKLDITLLAVIFSGFCGCMVSVVHTWAIHLKGPVYVSIFKPLSVVIAAAMSCYWSGDTINWILCCFMGKSKILSVPTSVSTFFSNKLLSRDSVTTHSSFVAQLSGYKGLEYTSPTLFSALSNLIPAFTFILAVFFRMEKISPKSWSTQAKIVGSLVSILGALIVVLYKGPTLISASSSPHQSPHVDFLKDSSPQQNWVLGGFLIAIEFILVPIWYIVQTNVIKDYPAEIIVVFFYNLCGTLISAPVCLLLDESNLSGWIIKPDITLVAILYSGFFCTGLSSLVHTWGIHIKGPVYVSSFKPVSIGIAAAFSAIFLGDALYLGIVVGGVIISIGFYAVLWGKANEELSEYIDSSQSQPTSKVNQPLLL* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3374 582 Pfam EamA-like transporter family 312 380 IPR000620 GO:0016020|GO:0016021
Amo16g3374 582 PANTHER WAT1-RELATED PROTEIN 298 560 - -
Amo16g3374 582 PANTHER WAT1-RELATED PROTEIN 60 274 - -
Amo16g3374 582 SUPERFAMILY Multidrug resistance efflux transporter EmrE 312 382 - -
Amo16g3374 582 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 131 - -
Amo16g3374 582 SUPERFAMILY Multidrug resistance efflux transporter EmrE 450 556 - -
Amo16g3374 582 PANTHER WAT1-RELATED PROTEIN 298 560 IPR030184 GO:0016021|GO:0022857
Amo16g3374 582 PANTHER WAT1-RELATED PROTEIN 60 274 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3374 Amo-Chr16 141717043 141738426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3374 314 572 Nodulin-like Gene Family AT5G40240 54.615 1.53e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3374 - - aip:107605316 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3374 16 141717043 141738426 Amo16g3374 16 141717043 141738426 ECH