Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3370 ATGGAGAGAAATTCTTTCTGGGTTGCCTTCATTGCATCCCTTTTCCTCCTAAGAATGGTTAATTGTGTTGATTATGAGGTCAAGAGCACAATGATACTCTTTCTTGCACAACTCTCTGGCAATGATAGTCATCAGAATTTCACTTTGAATTGGAAATTAGGCTCTGATCCCTGCATAGATCAATGGCAAGGTGTAGAGTGTGATACTAAAAACTCATCCATCAAGAATTTGCTTCTTGACAAGCTAAGCTTATCAGGAACTCTTGATGTTGCTATGCTTTGCAACTTGCATCCCCTGGCTGCATCTCTCATTTATCTTAGTCTCGACGGCAACGGCGTCCACGGAGGCATCCCGGAAGAGATTGGAAGCTGCAAACAACTCACTCAACTACACTTAAGCGGAAACCAACTTTCTGGAACCCTTCCTAGTTCACTTTCCAAGTTAAACAATTTAAAGAGTCTTGATATATCTAACAACAAATTTTCGGGACAGTTACATCCTGATTTGGCTAGAATCTCAACGCTGAATATGTTCCTAGCACAGAATAATCAGCTCAGTGGAGAAATTCCGCCGTTTAATTTCTCTAATTTCGACCGGCTCGATGTCTCCTTCAACAATTTCAGTGGAGTTATTCCAGATATACATGGACATTTCACCTCTGAAAGCTTCCTCGGTAACCCTCAACTCTGTGGTGATCCATTACCAAAGAGTTGCACCGGCTCGCCGGTGCCTGCTAGCAAAGATTCCAAAGAACGGAAGGAATCGCCGGTGCCTGCAGCCGCTGCCGGGGACAATTCTGATGAAGAACCAAAGAAATCATCAAAGGGCCCTTCAAAAGAGCAGATTCTTATGTATTCAGGCTATGCGGCGATCGGAGCTTTAGTGATCCTTTTAATTGTCTGGAAGCTGTGCAGAAGAAAAAAGAAAGAAAAGAGAATTGAAGCATTGAATGAGAAAGTTGTAACTCAAGGTAGTGCTCAAAAAGCTAGCCATGTTTCAAGTGAATACAGAGCAGGGGTAAGCCGATCAGACTTCTCATTAACTTCCGAGAGCGGCATGGTTTCGCAATCACTCGTGGTTCTTTCGAATTCGAGGAATACTATGCATGAATTGAAATTAGAGGACTTGCTCAAGGCTCCGGCTGAATTGATTGGAAGAGGAAAGAATGGTAGCCTTTATAAGGTGGTTTTTGAAAATGGGACAACGGTGGTTGTGAAAAGGATCATCGATAGGTCTGTTCCCGGCCGCGATTTCAAGCAAAGAATGCAGATTTTGAGTCAAGTGAAGCACCCTTATGTGCTCTCACCTCTTGCTTTCTATTGCTCCAAGCAAGAGAAGCTTTTGGTCTATGAATATCAGCAAAATGGAAGTTTATTTAAGCTTCTACACGGTGCCCAAAAAGCCTTTGACTGGAGCAGCAGGCTTGGAGTTGCAGCTACGACCGCTGAGGCATTAGCTTTCATGCATCAAGAGCTTGGGCAACAAGGTATCTCACATGGCAACCTAAAATCATCCAACATTTTGCTAAACAAGAACATGGAGCCATGCATAAGTGAGTATGGTGTGATGGGTGGAGACGACGACCAACAACAACAACATAGTTCATCTTTTGTTAGTCCTTTCACTTCCATGTCATCATCGGATCACGCGGCCTTCAAGGCCGATGTCTATGGATTCGGCGTCATTCTGCTCGAACTACTCACCGGAAAGTTGGTAAAGAGCGAAGGGATGGAACTGACGGAGTGGGTTCAGTCTGTTGTGAGGGAAGAATGGACGGGTGAAGTGTTTGATAGGACTCTGATATCAGAGTATGCAAGTGAAGAAAGGATGGTGAATTTGCTTCAGGTGGCTATAAGGTGTGTTAATCGTTCCCCTGAGGCTAGGCCAAGTATCAACCAAGTCGCTCTAATCATTAACACTATAAAGGAGGAAGAAGAAAAGTCTTTGATTTATCAAGTAGCGTCTATACTCTATATACTCATCTGGAATCTGAGTCAGCTAAGAGTGTTCAATTCTTTTGGGGCCAAATTAAATGTTGGGATGAGCGGGAGGATGAATAAGTGGTCCCATTTGAAGATGGCTTGGATTGAACACTCCCAGATCAACCGAAAAGACGGTTACATAACAAACCCACCTCCTCTTGTTTCAACATCCCCATATTCTGGAACTTTCCAGAAAGAACCTTCTGCTTCAACAACACCCTCACCTTCCACATCCGGTGCTAAATTCAGTCCTGCTGTGCTCTTCATCATAGTGATTCTAGCTGTTCTTTTCTTCATCTCCGGTCTCCTTCACCTTCTTGTTAGGTTTCTCGTTAAAAACCCTTCATCTTCCTCTGCATCTGCTCAACCTAATCGGCACCATGAAGGTTCTCTCTCTGACACTCTTCAGAGGCAGCTTCAGCAGCTTTTCCATCTCCATGACTCTGGTCTTGACCAGGCTTTCATCGATGCGCTTCCTGTTTTCCAGTACAAGGAGATCAAGGGGCCGAAGGAACCTTTCGACTGCGCCGTTTGCCTCTGCGAGTTCTCCGACAAGGATAAGCTCCGGTTGCTCCCTGTGTGCAGCCATGCCTTCCACATCAGCTGTATAGACACATGGCTTCTCTCGAATTCCACTTGCCCACTCTGTAGAGGAACACTCTTCGCGCCGGGGTTTTCCATGGAGAATCCGGTGTTTGATTTCAATGATTTGAGGGAAGATGAGGGCTGCCAGTTCCCCTGTAGTAACAATAACAATGGAGGGAAGATGGTTGCAGTTCAAGAGACTGAAGAAGCTGCGGACAAGGGGCTTGTCGCTGTGAGGCTTGGTAAATTTAGGAGGGTTGATTTGGAGGCGGCCGAGCCGGAAGGTGGAGAGGCTAGTAGTAGTAATTTGGATGCAAGAAGATGTTTCTCAATGGGGTCTTACCAGTATGTACTTGGAAAATCGGATCTCCGGATAACCTTGAATTGTGATCATCGCCGGCAGGGTCGCGGCGATGATAATTCCGAGGAGGGATCAGTTGAGGTTGAGAGGGAAGGAAAGAACATTACTAGTGTTAGCAGAGGAGAGAGCTATTCTGTTTCCAAAATATGGTTGTGGTCAAAGAAGGGAAAATTTTCAGTTTCTTCAGATGCACACAACATTGGATTACCATCTTCTCTTAATTCAGATTTGCCTTGGATGAGAGAAATGGAAGGTACATCAGAAAAGGTATAA 3201 0.4483 MERNSFWVAFIASLFLLRMVNCVDYEVKSTMILFLAQLSGNDSHQNFTLNWKLGSDPCIDQWQGVECDTKNSSIKNLLLDKLSLSGTLDVAMLCNLHPLAASLIYLSLDGNGVHGGIPEEIGSCKQLTQLHLSGNQLSGTLPSSLSKLNNLKSLDISNNKFSGQLHPDLARISTLNMFLAQNNQLSGEIPPFNFSNFDRLDVSFNNFSGVIPDIHGHFTSESFLGNPQLCGDPLPKSCTGSPVPASKDSKERKESPVPAAAAGDNSDEEPKKSSKGPSKEQILMYSGYAAIGALVILLIVWKLCRRKKKEKRIEALNEKVVTQGSAQKASHVSSEYRAGVSRSDFSLTSESGMVSQSLVVLSNSRNTMHELKLEDLLKAPAELIGRGKNGSLYKVVFENGTTVVVKRIIDRSVPGRDFKQRMQILSQVKHPYVLSPLAFYCSKQEKLLVYEYQQNGSLFKLLHGAQKAFDWSSRLGVAATTAEALAFMHQELGQQGISHGNLKSSNILLNKNMEPCISEYGVMGGDDDQQQQHSSSFVSPFTSMSSSDHAAFKADVYGFGVILLELLTGKLVKSEGMELTEWVQSVVREEWTGEVFDRTLISEYASEERMVNLLQVAIRCVNRSPEARPSINQVALIINTIKEEEEKSLIYQVASILYILIWNLSQLRVFNSFGAKLNVGMSGRMNKWSHLKMAWIEHSQINRKDGYITNPPPLVSTSPYSGTFQKEPSASTTPSPSTSGAKFSPAVLFIIVILAVLFFISGLLHLLVRFLVKNPSSSSASAQPNRHHEGSLSDTLQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIKGPKEPFDCAVCLCEFSDKDKLRLLPVCSHAFHISCIDTWLLSNSTCPLCRGTLFAPGFSMENPVFDFNDLREDEGCQFPCSNNNNGGKMVAVQETEEAADKGLVAVRLGKFRRVDLEAAEPEGGEASSSNLDARRCFSMGSYQYVLGKSDLRITLNCDHRRQGRGDDNSEEGSVEVEREGKNITSVSRGESYSVSKIWLWSKKGKFSVSSDAHNIGLPSSLNSDLPWMREMEGTSEKV* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3370 1066 SUPERFAMILY Protein kinase-like (PK-like) 381 635 IPR011009 -
Amo16g3370 1066 PANTHER OS10G0387400 PROTEIN 5 651 - -
Amo16g3370 1066 Gene3D Phosphorylase Kinase; domain 1 346 452 - -
Amo16g3370 1066 PANTHER OS05G0588300 PROTEIN 5 651 - -
Amo16g3370 1066 SMART ring_2 836 877 IPR001841 -
Amo16g3370 1066 SUPERFAMILY L domain-like 48 223 - -
Amo16g3370 1066 Pfam Leucine rich repeat N-terminal domain 34 68 IPR013210 -
Amo16g3370 1066 MobiDBLite consensus disorder prediction 235 278 - -
Amo16g3370 1066 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 811 883 IPR013083 -
Amo16g3370 1066 Pfam Protein kinase domain 382 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3370 1066 Pfam Ring finger domain 835 878 IPR001841 -
Amo16g3370 1066 Gene3D Ribonuclease Inhibitor 193 241 IPR032675 -
Amo16g3370 1066 ProSiteProfiles Zinc finger RING-type profile. 836 878 IPR001841 -
Amo16g3370 1066 CDD RING-H2_PA-TM-RING 835 878 - -
Amo16g3370 1066 Gene3D Transferase(Phosphotransferase) domain 1 454 658 - -
Amo16g3370 1066 ProSiteProfiles Protein kinase domain profile. 378 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3370 1066 SUPERFAMILY RING/U-box 815 884 - -
Amo16g3370 1066 Gene3D Ribonuclease Inhibitor 28 192 IPR032675 -
Amo16g3370 1066 MobiDBLite consensus disorder prediction 987 1010 - -
Amo16g3370 1066 MobiDBLite consensus disorder prediction 719 738 - -
Amo16g3370 1066 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3370 Amo-Chr16 141603766 141609036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3370 51 642 Receptor kinase-like Gene Family AT1G68400 34.304 8.37e-92 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo16g3370 Pkinase 4.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3370 - - aip:107605318 1221.45