Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3367 ATGTATAGAATAATTTCGACGCCGGCGTCAAAGTTCCGCCAGTTCGGGCGACTCCGATCAAGAACTAGAAACACCGCCAACTCTGACGAGGAGAACGCATTCCAGATCCTATGGCGCTACCAGATCCTAGACCCGGACAGCGACATAGTTGCGTATTGGAACAGGGTGTTCCTCGTGGCAAGTCTCCTCGCGCTCTTCGTGGACCCTCTTTACTTCTTCCTCCCCACGGTGGGTGGCACCGCTTGCCTCAAGGCGGACCCCAGACTCAGCATCATCGTCACCATTATGCGAACCTTTGCCGATCTCTTCTACATCCTCCACATGGTCTTGAAGTTCCGCACCGCCTTCGTCGCCCCCAATTCTAGAGTCTTCGGCCGTGGTGACCTTGTCATGGACCCTCACGAAATCGCCATGCGCTACTTGAAGTCCGATTTTGTTATCGACCTTGCCGCCACTATTCCTTTGCCCCAGGCATCAAGTAGTTCTTCAACCACGGATCATGCCAACAACACTCTTGCACTCTTTGTTCTAATTCAGTATATTCCCAGGCTCTTTCTTATCTTTCCTTTGAACCAGCGTATCACGAAAACCACTGGCGTTATTGCCAAAACCCCCTGGATTGCAGCCGCATACAATCTTCTTCTCTACATGCTAGCTAGTCATATTACAGGAGCAACGTGGTATCTGTCCTCAATTGGGAGACAATTCAACTGCTGGAAAGCAGAGTGCGAAAGAGAGAACAGATCAAAAACCATAACTTGCTTGCCTACTTTTCTTGATTGTAACAGTGTGAGTTCACCTGCAAGGCAACACTGGCTAAATGTCACTCAAGTTATTAACAGATGCGATCCCAAGGCCAAGCTCAACGTCAAGTATAAGTTTGGCATGTTTGCAGATGCTTTTCTCAATGATGTTGTTACTACTAACTTTGTGGAAAGATACTTCTATTGTCTTTGGTGGGGATTAAGAAATTTAAGCTCGTATGGACAGAATTTGGACACAACCACATACCTCCCAGAGACATTTTTCTGCATCTTCTTATGTCTTGCTGGATTAATTCTCTTTTGTCTTTTGATTGGAAACATGCAGACATACTTGCAATCAATGTCAGTTAGACTTGAAGAATGGAGGATTAGGAAGAATGACACTGAGCAATGGATGAGACATCGCCAATTGCCTCCAGACTTGCAGGAACGCGTTCGTCGCTTTGTTCAGTATAAATGGCTTGCCACCAGAGGAGTGAATGAAGAGTCCATACTACTTGATCTACCTTTGGATCTCCGTCGTGAAATTCAACACCACTTGTGCCTTTCTCTTGTTCGACGTGTCCCTTTCTTCTCACAAATGGATGACCAGCTCCTTGATGCAATCTGTGAACGGCTGGTGTCATCATTAAGCACAGAAGGCACATATATATTCCGAGAGGGAGATCCCGTGGACGAAATGTTGTTCATAATAAGAGGACAATTGGAGAGCTCCACAACCAATGGAGGAAGGTCTGGTTTCTACAATTCCATCACACTTAGGCCCGGCGACTTTTGCGGCGAGGAGCTGTTGACATGGGCCTTAATGCCAAATTCCACCCTCAACCTGCCTTCCTCTACTCGAACTGTAAAAGCTTTATCAGAAGTCGAGGCTTTTGCATTGGAAGCAGAGGATCTAAAGTTCGTGGCCAGTCAATTCAAGCGGCTTCATAGCAAGAAACTCCAGCACGCGTTTAGGTACTACTCCCAGCAATGGAGGACATGGGCTTCTTGTTTCATACAGGCGGCATGGCGAAAGTATCAGAAGAGGAAAGCGGCGAGGGAGTTGTCTTTGAAGGAGGGACACTTTTACATGTCTCTCCCTGAGAAGGACAGAGAAATGGATCAAAGTGGAGGATCATCATCATCTCCAGGGAATGTGAGAAAGGTTCAGAACATTAGTACAACCATTTTGGCTTCAAGGTTTGCGACTAATACAAGGAAAGCTAAGCTTCGTGGCAGTGATCCTGTGCCACAGTTGTTCAAGCCTGATGAACCTGACTTCTCTGTAGATCGTGAGGAAGTTTAG 2052 0.4678 MYRIISTPASKFRQFGRLRSRTRNTANSDEENAFQILWRYQILDPDSDIVAYWNRVFLVASLLALFVDPLYFFLPTVGGTACLKADPRLSIIVTIMRTFADLFYILHMVLKFRTAFVAPNSRVFGRGDLVMDPHEIAMRYLKSDFVIDLAATIPLPQASSSSSTTDHANNTLALFVLIQYIPRLFLIFPLNQRITKTTGVIAKTPWIAAAYNLLLYMLASHITGATWYLSSIGRQFNCWKAECERENRSKTITCLPTFLDCNSVSSPARQHWLNVTQVINRCDPKAKLNVKYKFGMFADAFLNDVVTTNFVERYFYCLWWGLRNLSSYGQNLDTTTYLPETFFCIFLCLAGLILFCLLIGNMQTYLQSMSVRLEEWRIRKNDTEQWMRHRQLPPDLQERVRRFVQYKWLATRGVNEESILLDLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFYNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALSEVEAFALEAEDLKFVASQFKRLHSKKLQHAFRYYSQQWRTWASCFIQAAWRKYQKRKAARELSLKEGHFYMSLPEKDREMDQSGGSSSSPGNVRKVQNISTTILASRFATNTRKAKLRGSDPVPQLFKPDEPDFSVDREEV* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3367 683 MobiDBLite consensus disorder prediction 619 640 - -
Amo16g3367 683 MobiDBLite consensus disorder prediction 625 640 - -
Amo16g3367 683 Gene3D Helix hairpin bin 373 436 - -
Amo16g3367 683 Gene3D Jelly Rolls 443 563 IPR014710 -
Amo16g3367 683 Pfam Cyclic nucleotide-binding domain 468 556 IPR000595 -
Amo16g3367 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 31 679 - -
Amo16g3367 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 31 679 - -
Amo16g3367 683 Gene3D - 58 370 - -
Amo16g3367 683 SUPERFAMILY Voltage-gated potassium channels 44 367 - -
Amo16g3367 683 ProSiteProfiles cAMP/cGMP binding motif profile. 445 575 IPR000595 -
Amo16g3367 683 SUPERFAMILY cAMP-binding domain-like 375 570 IPR018490 -
Amo16g3367 683 SMART cnmp_10 445 576 IPR000595 -
Amo16g3367 683 MobiDBLite consensus disorder prediction 656 683 - -
Amo16g3367 683 Pfam Ion transport protein 52 372 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo16g3367 683 CDD CAP_ED 445 576 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3367 Amo-Chr16 141576298 141579431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3367 20 683 Ion Channels AT5G14870 66.232 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3367 K05391 - gmx:100802812 1130.16