Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3339 ATGTTGTCACAAATCCGTCACAGAAACATTGTCAAGCTCCATCGATTTTGTCTCCACCATCGGTGCATGTTTTTTGTATACGAATACATGGAAAGAGGAAGCTTATTTTATGCCTTGAACATGGATGACGAAGAAGCTAAGGAGTTAAGTTGGAGCAAGAGGGTGGATATCATTAGCGGAACAACTAATGGATTGTCTTACATGCATCATGATTGTTTCCTGCCAATAGTTCACAAAGATGTAACAAACAACAACATTTTGTTGAACTCAGAGTTGCATGTTGTTGTCTCAGACTTTGGAACTGCTAGACTTCTTGATCCTGATTCTTCAAATCAGACATTACAAGTTGGAACATATAGGTACCTTGCACAAGAGTTGGCTCATACAATGACTGTGACAGAAAAAGAGCTAATCTCATCTTTGCTAGATGACACTTCTAACAAAAACATAATGGTAAAAGATCTCTTAGATCCACGCATCCGTTTATCATTAAGTCAAAAAGAAACTCAAGCTATAGCTCATGTAGTAACACTGGCATTAACATGCTTGCGTTCTAATTCAAAGTCAAGCCCATCAATGCAGCAAGTGGCGCACAAGCTTTCTGCTTCTAAACAGTCACTGTTGTTGCTTTTCGCTGAGATTACAATTCATCAATTGATAGCATAA 666 0.3829 MLSQIRHRNIVKLHRFCLHHRCMFFVYEYMERGSLFYALNMDDEEAKELSWSKRVDIISGTTNGLSYMHHDCFLPIVHKDVTNNNILLNSELHVVVSDFGTARLLDPDSSNQTLQVGTYRYLAQELAHTMTVTEKELISSLLDDTSNKNIMVKDLLDPRIRLSLSQKETQAIAHVVTLALTCLRSNSKSSPSMQQVAHKLSASKQSLLLLFAEITIHQLIA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3339 221 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 219 - -
Amo16g3339 221 SUPERFAMILY Protein kinase-like (PK-like) 2 200 IPR011009 -
Amo16g3339 221 Pfam Protein kinase domain 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3339 221 Gene3D Transferase(Phosphotransferase) domain 1 34 209 - -
Amo16g3339 221 ProSitePatterns Tyrosine protein kinases specific active-site signature. 76 88 IPR008266 GO:0004672|GO:0006468
Amo16g3339 221 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3339 221 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 219 - -
Amo16g3339 221 Gene3D Phosphorylase Kinase; domain 1 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3339 Amo-Chr16 140821450 140822280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3339 2 123 Receptor kinase-like Gene Family AT4G08850 55.738 1.20e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo16g3339 Pkinase 5.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3339 - - ahf:112752745 257.684