Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3336 ATGTTTTTGGCATACGAATACATGGAAAGAGGAAGCTTATTTTATGCCTTGAACATGGATGATGAAAAAGCTAAGGAGTTAAGTTGGATCAAGAGGGTGGATATCATTAGCGGAACAGCTAATGGATTGTCTTACATGCATCATGATTGTTTTCCGCAAATAGTTCACAAAGATGTAACAAACAACAACATTTTGTTGAACTCAGAGTTGCATGTTGTTGTCTCAGACTTTGGAAATGCTAGACTTCTTGATCCTGATTCTTCAAATCAGACATTACAAGTTGGAACATATGGGTACTTTGCACCAGAGTTGGCTCATACAATGACTGTGACAGAAAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTGGAAACTTTAATGGGAGGCACCCAAGAGAGCTAA 405 0.3877 MFLAYEYMERGSLFYALNMDDEKAKELSWIKRVDIISGTANGLSYMHHDCFPQIVHKDVTNNNILLNSELHVVVSDFGNARLLDPDSSNQTLQVGTYGYFAPELAHTMTVTEKCDVYSFGVVALETLMGGTQES* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3336 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3336 134 ProSitePatterns Tyrosine protein kinases specific active-site signature. 54 66 IPR008266 GO:0004672|GO:0006468
Amo16g3336 134 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
Amo16g3336 134 Pfam Protein kinase domain 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3336 134 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 130 - -
Amo16g3336 134 SUPERFAMILY Protein kinase-like (PK-like) 2 129 IPR011009 -
Amo16g3336 134 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3336 Amo-Chr16 140817574 140818083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3336 2 129 Receptor kinase-like Gene Family AT2G35620 49.612 1.14e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo16g3336 Pkinase 1.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3336 - - gmx:100789677 201.445