Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3311 ATGATTTTCAAGACATTAGAAGAAGCCAAAAAGTTCTACAAAAATTATTCCAAACTTGCCAGTTTTTCTACGAAAATAAGAAACACGACTCGGGACGGAGACAAGATTAAGAATCAACTAATTGTATGCAGCAGAGAGGGGAGGTGGAAATCCAAGATATCTCCTACTCTAAAGACAAATTCCTCAGCCGGCATAAACTGTCCAACCATGATATATGTACACATATTGAAGGACGTGGGTCTTTGGACAATTTCCACAGTTGTTTTGAATCACTCACACCCCTGCTGTCCAGACCGTGCAGAGATGCTCAAACAATACAGGGAACTAAGCATGTTTGTGCGTCGCACCATTGAAACCAACGAGGAAGCCGGAATTAGACCTAGCAAAACTTACCAATCATTCGTAGCAGCAGCCGGCAGTCACCATGAATTAACTAACCAGTTCGGTTCATTCTGCAGAGCTGTACGAGGATCGGCATATATGGATTCCAGTTTATCTGGATCACCACTTCTAGTCCGGGATGAGAAGCACACAAAGGAGCGAGAGCATACAATTCGTGAAGTAATACGACAATTGCCTAGCAAGCAAAGAGCAAAGAGAGAGAGAATTCGACGCGGCAGATTTTCACACCGTGATATCGTGTGCAACAAAATCAGCAGTAGAGGCCCGGTTTCAGCAGTGTATACCCACGAGAAGTCAAGTGAACTGCATCACAAGATCAATGCATTCCACCTTAGGTTTCACAACATACAAAGTCGTAGAGCAGGTTTTCAACTCCACATTCAACAAGTTTTTCGTCACCTACGACGCAGTATCACGAGAGGTAAAGTGCCAGTGCCTGCTATTCTAGTCAAGGGGAATACTGTGCCGCCATTCCTTGAGCGTCCTAAGCTTCGAGCGAGTGGATAA 909 0.4444 MIFKTLEEAKKFYKNYSKLASFSTKIRNTTRDGDKIKNQLIVCSREGRWKSKISPTLKTNSSAGINCPTMIYVHILKDVGLWTISTVVLNHSHPCCPDRAEMLKQYRELSMFVRRTIETNEEAGIRPSKTYQSFVAAAGSHHELTNQFGSFCRAVRGSAYMDSSLSGSPLLVRDEKHTKEREHTIREVIRQLPSKQRAKRERIRRGRFSHRDIVCNKISSRGPVSAVYTHEKSSELHHKINAFHLRFHNIQSRRAGFQLHIQQVFRHLRRSITRGKVPVPAILVKGNTVPPFLERPKLRASG* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3311 302 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 103 - -
Amo16g3311 302 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Amo16g3311 302 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3311 Amo-Chr16 139853146 139854948 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g3311 FAR1 3.4e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3311 - - aip:107646405 265.388