Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3295 ATGGAGAACAACAAAGACGCCGGCGACGAACCGCCACGTTCTCCCATGGCGGACCCCACAGAATCCGATCCCAAACTAGAAACCAAATCAGAAACCGACTCACAGCCACCGCCGAACGAGGGAGGGGAGGATGCAGAGAGCGCAGAGAAGAAGGAAGAGACCGCAGAGGATGTTATTGATGATCCTCCGCTTTCAACCCCGCTAAGCCTCGAGAAGGCGCACGAAGACATGGATCAATTCCTCGAAACACTGAAACAGAAGGAGGAAGCGTCGGTTGAGATGCCTGTTTTCCTTGACAAGTTCTTGGATCTGGTGGAGGACAAGATAGCAAGGTACGACGCTGGAGACGATAGAGCGGATGATTCGTCGTTGTTGGAAGCGGTGAGCCGGATTTCGAGCCTAATGAAAACCGTACAGACTCAGCACCAACCAGAACCGCTCATGAACCGCATCGGCTCGATCCAGCAGCGTGCAATGACGTACTTGGAGGAAGATTTCCGGTTGTTGATGGAACAATATAGAAACGCTACGGAATCAGATCCCGGCGGCCATGACCACAAGGGGAAGCACGTGGAGGAACAGCCGCAGGAGGATTCCGAGAACGCGCCGGAGGAATCCGAGTTGGATTTCCCGGGATATTCCGAGGAAACTATTTCCAGCCTGAAAGAGATTGCCGGCGAAATGGTCGCCGGCGGTTATACCGCTGAGTGCTGCCAGGTTTATATGACCTCAAGGAGGAACGCGTTCGACGATGCTCTGCAAAAATTAGGGTTCGAGAAGTTTAGCATCGACGAGGTCCAGAAGGCGCATTGGGAGACTCTTTCGAGGGAGATGATCCCGTCTTGGATCAACACGTTCAAGCAGTGCGCCGCCGTGTACTTCCCCGGCGAGAGGAGGTTGGTGGATGAGGTGTTCGCCGATCGGCCTGAATTGGCAGCGGGGATCTTTAGCAACCTCTGTCGCGGCGTGGTGATCCAGCTGCTGAACTTCTTGGAGGGAACAGCGATGACAAAGCGCGCGGCGGAGAAGCTCTTCAAGCTCCTCGACATGTACGAGACCGTTCGGGATGTGATCCCGAAAATGGACGAGCTCTTCTCCGAGGAGCACGTGGCGGAAGAGCTGAAGACGGAGCTGAATCTGGCCAAGTCGAGGCTTGGCGAGGCTACTATCTCCATCTTCGGCGACTTCGAGAACAATATAAAGTCTGATACCGGAAAGACGCCGGTGCCAGGTGGCGCCGTACACCCTGTGACGCGCTATGTGATGAACTACCTTACTACAAGTGGTGATTACAAGGAGACGTTGGAGCAGGTTTTCAAGGAGCATTCGAAGATCGAGCGCGCAGATTCCACCAGTAGGCCCCACGGCGAGAGTCAGGGGCAGAATGGGAAAGAGGATGAGAAGGCAGCTGCGTCGCCGTTTGCAGCGCAGGTGATGAGGGTGATGGACTTGCTGGACTCCTACCTCGACTCCAAGGCCAAGCTCTACAAGGATAATTGTCTAACTTCCTTTTTCATGATGAACAATGGAAGGTACATTCTGCAAAAGATAAAGGGGTCAATTGAGATGGCGCAAGTGATGGGAGACAACTGGTGTCGGAAGAGATCCTCAGAGCTTCGAGCATACCACAAAAAATATATGAGAGACACATGGCACAAAGTGTTAGAATCCCTGAAACATGAGGAGCTGACGGTGAACGGCAAGGTTGATAAACCTAAACTAAAGGAAAGGTTCAAGACCTTCAACGCCTTGTTTGACGAGATCCACAGGACACAGAGCTCGTGGGTTGTGAAGGACGGGCAGCTCCAATCAGAGCTTAGGGTCTCCATCTCCGCTGTAATCATCCCCGCTTACAGGGCTTTTCTTGGAAAATACGCTCAGGTATTGGATCCTGGCCGCCAAACAGAGAAGTATATCAAGTACCAACCTGAAGATATAGAGAACTATATTGATGAGTTATTTGATGGAAAGCCTCATCAGTCTATTGCCAAAAGGAAAACATGA 2004 0.5225 MENNKDAGDEPPRSPMADPTESDPKLETKSETDSQPPPNEGGEDAESAEKKEETAEDVIDDPPLSTPLSLEKAHEDMDQFLETLKQKEEASVEMPVFLDKFLDLVEDKIARYDAGDDRADDSSLLEAVSRISSLMKTVQTQHQPEPLMNRIGSIQQRAMTYLEEDFRLLMEQYRNATESDPGGHDHKGKHVEEQPQEDSENAPEESELDFPGYSEETISSLKEIAGEMVAGGYTAECCQVYMTSRRNAFDDALQKLGFEKFSIDEVQKAHWETLSREMIPSWINTFKQCAAVYFPGERRLVDEVFADRPELAAGIFSNLCRGVVIQLLNFLEGTAMTKRAAEKLFKLLDMYETVRDVIPKMDELFSEEHVAEELKTELNLAKSRLGEATISIFGDFENNIKSDTGKTPVPGGAVHPVTRYVMNYLTTSGDYKETLEQVFKEHSKIERADSTSRPHGESQGQNGKEDEKAAASPFAAQVMRVMDLLDSYLDSKAKLYKDNCLTSFFMMNNGRYILQKIKGSIEMAQVMGDNWCRKRSSELRAYHKKYMRDTWHKVLESLKHEELTVNGKVDKPKLKERFKTFNALFDEIHRTQSSWVVKDGQLQSELRVSISAVIIPAYRAFLGKYAQVLDPGRQTEKYIKYQPEDIENYIDELFDGKPHQSIAKRKT* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3295 667 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 56 662 - -
Amo16g3295 667 PANTHER EXOCYST COMPLEX PROTEIN EXO70 56 662 IPR004140 GO:0000145|GO:0006887
Amo16g3295 667 Coils Coil 371 391 - -
Amo16g3295 667 MobiDBLite consensus disorder prediction 1 74 - -
Amo16g3295 667 MobiDBLite consensus disorder prediction 176 212 - -
Amo16g3295 667 Gene3D Exocyst complex component Exo70 100 664 - -
Amo16g3295 667 Pfam Exo70 exocyst complex subunit 281 652 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo16g3295 667 Coils Coil 70 90 - -
Amo16g3295 667 MobiDBLite consensus disorder prediction 443 464 - -
Amo16g3295 667 SUPERFAMILY Cullin repeat-like 112 655 IPR016159 -
Amo16g3295 667 MobiDBLite consensus disorder prediction 43 58 - -
Amo16g3295 667 MobiDBLite consensus disorder prediction 178 197 - -
Amo16g3295 667 MobiDBLite consensus disorder prediction 443 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3295 Amo-Chr16 139526780 139530393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3295 30 667 EXO70 exocyst subunit family AT5G13990 48.895 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3295 K07195 - gmx:100820172 799.66