Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3279 ATGCAATTGCTGGAAGGCACACTTCTAAGAGGTATTTACATAATTAACCTTGGCAAGATATGGGAGAGGCTCCATCTTGCTGCAAGGATTATTGTTGCTATCAAGAACCCTCAGGATATCAAAGTTTGCACAATACATGGGTGCGAATGCAATTGCTGGAAGGCACACTCTTGGAACATTTACTAA 186 0.414 MQLLEGTLLRGIYIINLGKIWERLHLAARIIVAIKNPQDIKVCTIHGCECNCWKAHSWNIY* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3279 61 Gene3D - 4 48 - -
Amo16g3279 61 SUPERFAMILY Ribosomal protein S2 10 43 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3279 Amo-Chr16 138953809 138954599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3279 11 42 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 75.000 4.17e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3279 K02998 - aip:107647299 74.3294