Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3272 ATGGGAACCTCAAGAGATATTGCAATACGACTTGTAGCCGTGGTGTCCCTCTTGCTTGGGAGTTTACTTTCTATTGAGATCAGTGACACCAAAAGTCATGACTATATGTGCCTTGCATTGACTGCTACCTTCTTTGCAGGAGTCACTAAATTGGTACTTGGATATTGTGCTTTCATGAATGGTTATTGTAGGCTTAGTTTCTTCATAAATTTCCTATCTCATGTTTCCATTGTGGGTTTTATGGCTGGAGCTGCCATTACTATTGCACTGCAACAGTTTAAAGGTCTGCTTGGCATAAAGGACTTCACCATAAAAATTGATATTGTTTTTGTAATGCATTCGGTTTGGAGTAATGTGCATCATGGGATAAATCTTTTCATTTTTCTTTATATTTATATATGTTTCAGTATATTTAGATGA 420 0.3643 MGTSRDIAIRLVAVVSLLLGSLLSIEISDTKSHDYMCLALTATFFAGVTKLVLGYCAFMNGYCRLSFFINFLSHVSIVGFMAGAAITIALQQFKGLLGIKDFTIKIDIVFVMHSVWSNVHHGINLFIFLYIYICFSIFR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3272 139 Pfam Sulfate permease family 1 125 IPR011547 GO:0016021
Amo16g3272 139 PANTHER SULFATE TRANSPORTER 1 136 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo16g3272 139 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3272 Amo-Chr16 138374543 138375061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3272 1 124 Inorganic Solute Cotransporters AT1G78000 60.800 8.37e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3272 K17470 - sind:105169207 139.813