Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3271 ATGGGAGACGTTCTTCCCCTTGCATGTTATCCAGTTTCTGTGACTGAAGCTAATAGAATATGGCAAACGGGTAATATCATAGACTCTGAGCTTCCTACTCTGGCCTTTCAAGTTGCCTACACTGTCTTCGTAGCCTGCCTTTTCTTCCTTCTATTCAAACCCTTCCATCAATCTCGCCTTATTACATACGTCTTTGTAAGCAGGTTTCCTACTACTCCACCTCTCCTGAGAAGATTTGAATTCCTGTTTGCTTTAGTTTATCCTATAACTGGGATAATGAATGTTGAAGTTATCTCAAACTTTGGCTTGATTTACTATGCGTTCCTCAATGGCTTAGAGATGAACTTGGATACAATTCTCAAAGCCAAAAAAGAAGCTACAAGCATTGCAGCTGCTGGAATAATCTTTCCTATGATAGCAGGATCTGGATTATATGCTTTACACCGAAGATTTTATATCAATAATATTTTCAAGCTTGAAGAAGTTTCAACTCATGTTTATTTAATTTGGAGTTTAGTTCTCTCAGTTACAGGTTTTCCAAACCTAGTAGAAATTCTTTCAGATCTCAAGCTTCATTACACTGGTCTAGGCAAAGTTGCCTTAACCGCCGCAATGATTATTGACACCTACAATTGGATTCTTTTCACATTGTTGATTCCATTCTCAACTTATAGTTCAAATGCAATTTATTCAGTGCTAAGCACAATCATGTTCGTTATCGTGTGCATCGTTTTGGTTCGTCCTATAATAACAAAGTTTGTTGAAAGAAAGACAGAGGAGAATGAATTGGATGAGTACCAACTACTTTTTGTGGTGATGGGGCTCTTGTTGTGTTCATATGTTACGGATATTATTGGCACACATGGCATTGTTGGTGCTTTTGTGTACGGACTAATTTTACCTCGTGGCAGATTTGCTGACTCGGTTATGGCGGTTTCTGATGATTTTGGTACCGGCTTTCTAGCATCAATTTACTTCTCTGGGACTGGAATGAGATTTCTGATTTCATCTGTTTTTTCTCATGCAAATTGGAAATTGACATTCCTCGTTGTCATCTTATTATGTGTCACAAAGATATTGGGAACTTTATTTGTCACCTCCTTATTTGGTAGGCCCGCCAAAGATGGTTTTGCCATAGGATTGCTTCTCAACACCAAAGGTGCCTTAGCTCTCATATTGCTAAGCATTGCTTGGGATAAGATGATTTTTTTTGCACCAACCTATGCTGTTCTTATTTCTGCTGTTCTTCTAATGACTATGGTAGTCTCTCCCATCATCAACCTGATCTTCAAGCCAAGAAAGCGGTTTCAACAAACGAAGCTAAGAACCATAGAAAGGCTAAGAATTGATGCAGAACTCCGAATGTTAGCATGCGTCCACACTAACCAGCACGCCACAAGCATGATCAACATCATTGAACTCTTCAGTGCTACAAGACTCTCCCCTGTATACGTTTTCGGCTTGTACCTTGTCGAAATCACAAACCGTGCCACTGCACTTGTTGTTGCTCATATGGACAAGCCGACTTCACAGCTCGGAGGCCAAACTGCCTTCACCCAATCACAGGTGGAGTTAGAAAACATTACTTTTACCTTCGAGGGTTTTGGAAACAGAGCTGGTCATGATGCTTTCAGGGTCGAGACCACCAGCGTGGTCTCGGCCTACGAAAGCATTCATGAAGATATTTTCAACTCCGCCAGAGAAAGAGGCGCAAGTTTGATTCTCCTTCCATTCCACAAACACTTGAGTAACGGTAATTTGCTTGAAACAACGAACTCCGTGTATAAGGATATAAACAAGAGCGTAATGCAAAATGCGCCTTGTTCTGTGGGAATCTTCGTTGATCGGAATCTTGGATCGTTTTCCAAAACCAAGCTTCGTATTCTTATGGTGTTTGTTGGAGGCCCAAACGATCGCGAAGCTTTAGCGATTGCATGGAAGATGGCTAGGCATCGTAATGTTGAACTATCGATGATTCGAATTCGGTTGTTTGATGAACCTGTGGAAATAGAATCAACTCATTTTGAAGAAGCACGTGGGATATTATCGTATGTAATGGATGAAGAGAAGCAAAGGGAGTTGGATGAAGGGTATATAAGTAAATTCAGATACACTGCTGTGAACAATGAGGATTCTATATCTTACTCGGAGGTTGATGTCCATACAAGTGAAGATGTTCCTAGAGTCTTGAAGGAACTTGATCAGAACGGTTGTGATTTGTACATTGTTGGACGAGGGTATTATAGGAACTCTAAAATATTCTCAAACTTATTGGAATGGTGTGAATGTGTGGAATTAGGAGTTATTGGGGATATTTTAGCATCAAATATTTTTGGTTCAAGCTCTTCTGTTTTAGTTGTTCAGCAATATGGTTTTGGAGGAATGGAATTTGGGAAGAAGAACTCTGCAAAACTCATTGTCAAGACAGAATAA 2433 0.4003 MGDVLPLACYPVSVTEANRIWQTGNIIDSELPTLAFQVAYTVFVACLFFLLFKPFHQSRLITYVFVSRFPTTPPLLRRFEFLFALVYPITGIMNVEVISNFGLIYYAFLNGLEMNLDTILKAKKEATSIAAAGIIFPMIAGSGLYALHRRFYINNIFKLEEVSTHVYLIWSLVLSVTGFPNLVEILSDLKLHYTGLGKVALTAAMIIDTYNWILFTLLIPFSTYSSNAIYSVLSTIMFVIVCIVLVRPIITKFVERKTEENELDEYQLLFVVMGLLLCSYVTDIIGTHGIVGAFVYGLILPRGRFADSVMAVSDDFGTGFLASIYFSGTGMRFLISSVFSHANWKLTFLVVILLCVTKILGTLFVTSLFGRPAKDGFAIGLLLNTKGALALILLSIAWDKMIFFAPTYAVLISAVLLMTMVVSPIINLIFKPRKRFQQTKLRTIERLRIDAELRMLACVHTNQHATSMINIIELFSATRLSPVYVFGLYLVEITNRATALVVAHMDKPTSQLGGQTAFTQSQVELENITFTFEGFGNRAGHDAFRVETTSVVSAYESIHEDIFNSARERGASLILLPFHKHLSNGNLLETTNSVYKDINKSVMQNAPCSVGIFVDRNLGSFSKTKLRILMVFVGGPNDREALAIAWKMARHRNVELSMIRIRLFDEPVEIESTHFEEARGILSYVMDEEKQRELDEGYISKFRYTAVNNEDSISYSEVDVHTSEDVPRVLKELDQNGCDLYIVGRGYYRNSKIFSNLLEWCECVELGVIGDILASNIFGSSSSVLVVQQYGFGGMEFGKKNSAKLIVKTE* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3271 810 Pfam Sodium/hydrogen exchanger family 92 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo16g3271 810 Gene3D - 489 787 - -
Amo16g3271 810 PANTHER CATION/H+ EXCHANGER 3 15 801 - -
Amo16g3271 810 Gene3D - 33 440 IPR038770 -
Amo16g3271 810 PANTHER CATION/H + ANTIPORTER 15 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3271 Amo-Chr16 138361927 138365485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3271 9 790 Antiporter Super Family AT2G13620 34.635 3.81e-166 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3271 - - gmx:100800072 1025