Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3267 ATGGCCATCTCTTTAAGCACTCCTCCTCCCTTTCGCTTCCTCTCAGGCTCACCACCCCCATTCCCCCTTTCTAATTTAACCCCAATTTCACCCTCACTCAACCATAATCGCCTCAGTTCTTCCAGGTTCAATTTCCCTGCACCAACAACCAAGCTTCCCACCATCAACTGCAATTACACCGCTTTTGAAGTTAGAGATGTTAGCTATCAGCCTCCGGGGACTCAGCTTAAGCTACTGAATTCAGTTAGTTTCTCACTTCCGGAGAAAAGTTTTGGTCTAATTTTCGGACAAAGTGGAAGTGGGAAAACAACACTCTTGCAGCTTCTTGCAGGAATAAGCAAACCGACCACTGGATCCATTTACAGCCAAAAGTATGGAAATGATGGAAATCCTATCCAGCCTCCTGAGCCTTTGTCACCAGAAAGAGTTGCTGAAACTGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAGCTATCAATTGAGAGAAAATCTTGCTTTAGGGCTTCAAAGGGCAATTAACTGGGTTGGATTGAATGGGATATCATTGGACAAAAATCCTCARTCCCTTAGCGGCGGTTACAAACGGCGCCTTGCTTTGGCAATTCAATTAGTGCAAATCCCTGATCTATTGATATTGGATGAGCCTCTTGCTGGACTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTTTAAAGCATCTAAAAAGGGAGTTGACTGTTCTTGTTGTCAGCCATGACTTGAGGGTTATGGTGGCAACTAGTGAAGGAAGGCCYRCATTGAGCAGCAGTTGTAAAGAGTGGTTGGCAGCAAAGATTGGAGTGGATATCAGAGGGAACCGGCATATGAAATCGATCATGGAAGATGGAGATGGGTGGCAACCTCAGAGAGGAGTTACTTCCATTGTAGTTCATACTCGCTGCCTTTTTATTAGCACCGGATTCTATGAGTGCTCATTGTTTGTAGTTGAAGTACTGCAACTAAGCCCATCTTGRGGCGGGTTCCAGATGGGCTCACAGTTTGGGGAAGACTTTGTTGACTTGGTGTCCGAATTAACTCTTCTGCCTTTGTCTGGGTTTGCAATGGAGATGGGGACAACCATTGAATTTGATGTTAAGTGCAGAAGATCTGGCATGGGAAATGTTGGTGTTGCTGGTTCATTGTTGACTYTTTCTYTGCCAAGAGTTCCAATTGTTAGAAAGCCTTCAAAGAGCTCGGAGATGGCTGCAGGTGTTTCTTGTTTGGACTCCCCTTCYACATCAAGCCCRGAATAA 1284 0.4502 MAISLSTPPPFRFLSGSPPPFPLSNLTPISPSLNHNRLSSSRFNFPAPTTKLPTINCNYTAFEVRDVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTTGSIYSQKYGNDGNPIQPPEPLSPERVAETVLDEVTFGWPRQKGSYQLRENLALGLQRAINWVGLNGISLDKNPQSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKRELTVLVVSHDLRVMVATSEGRPXLSSSCKEWLAAKIGVDIRGNRHMKSIMEDGDGWQPQRGVTSIVVHTRCLFISTGFYECSLFVVEVLQLSPSXGGFQMGSQFGEDFVDLVSELTLLPLSGFAMEMGTTIEFDVKCRRSGMGNVGVAGSLLTXSLPRVPIVRKPSKSSEMAAGVSCLDSPSTSSPE* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3267 427 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 291 IPR003439 GO:0005524
Amo16g3267 427 PANTHER HEAVY METAL TRANSPORTER 54 258 - -
Amo16g3267 427 CDD ABC_cobalt_CbiO_domain1 63 251 IPR015856 GO:0005524|GO:0016020|GO:0055085
Amo16g3267 427 Gene3D - 54 277 IPR027417 -
Amo16g3267 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 256 IPR027417 -
Amo16g3267 427 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 54 258 - -
Amo16g3267 427 Pfam ABC transporter 79 220 IPR003439 GO:0005524
Amo16g3267 427 SMART AAA_5 88 277 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3267 Amo-Chr16 138248604 138258654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3267 66 251 Calmodulin-binding Proteins AT2G36910 24.020 5.86e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3267 - - vun:114196181 362.073