Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3256 ATGGGAGACGTTCTTCCCCTTGCATGTTATCCAGTTTCTGTGAGTGAAGCTAATAGAATATGGCAAACGGGTAATATCATAGACTCTGAGCTTCCTACTCTGGCCTTTCAAGTTGCCTACACTGTCTTCGTAGCCTGCCTTTTCTTCCTTCTATTCAAACCCTTCCATCAATCTCGCCTTATTACATACGTCTTTGCAGGTTTCCTACTAACTCCACCTCTCCTGAGAAGATTTGAATTCCTGTTTGCTTTAGTTTATCCTATAACTGGGATAATGAATGTTGAAGTTATCTCAAACTTTGGCTTGATTTACTATGCGTTCCTCAATGGCTTAGAGATGAACTTGGATACAATTCTCAAAGCCAAAAAAGAAGCTACAAGCATTGCAGCTGCTGGAATAATCTTTCCTATGATAGCAGGATCTGGATTATATGCTTTACACCGAAGATTTTATATCAATAATATTTTCAAGCTTGAAGAAGTTTCAACTCATGTTTATTTAATTTGGAGTTTAGTTCTCTCAGTTACAGGTTTTCCAAACCTAGTAGAAATTCTTTCAGATCTCAAGCTTCATTACACTGGTCTAGGCAAAGTTGCCTTAACCGCCGCAATGATTATTGACACCTACAATTGGATTCTTTTCACATTGTTGATTCCATTCTCAACTTATAGTTCAAATGCAATTTATTCAGTGCTAAGCACAATCATGTTCGTTATCGTGTGCATCGTTTTGGTTCGTCCTATAATAACAAAGTTTGTTGAAAGAAAGACAGAGGAGAATGAATTGGATGAGTACCAACTACTTTTTGTGGTGATGGGGCTCTTGTTGTGTTCATATGTTACGGATATTATTGGCACACATGGCATTGTTGGTGCTTTTGTGTACGGACTAATTTTACCTCGTGGCAGATTTGCTGACTCGGTTATGGCGGTTTCTGATGATTTTGGTACCGGCTTTCTAGCATCAATTTACTTCTCTGGGACTGGAATGAGATTTCTGATTTCATCTGTTTTTTCTCATGCAAATTGGAAATTGACATTCCTCGTTGTGATCTTATTATGTGTCACAAAGATATTGGGAACTTTATTTGTCACCTCCTTATTTGGTAGGCCCGCCAAAGATGGTTTTGCCATAGGATTGCTTCTCAACACCAAAGGTGCCTTAGCTCTCATATTGCTAAGCATTGCTTGGGATAAGATGATTTTTTTTGCACCAACCTATGCTGTTCTTATTTCTGCTGTTCTTCTAATGACTATGGTAGTCTCTCCCATCATCAACCTGATCTTCAAACCAAGAAAGCGGTTCCAACAAACGAAGCTAAGAACCATAGAAAGGCTAAGAATTGATGCAGAACTCCGAATGTTAGCATGCGTCCACACTAACCAGCACGCCACAAGCATGATCAACATCATTGAACTCTTCAGTGCTACAAGACTCTCCCCTGTATACGTTTTCGGCTTGTACCTTGTCGAAATCACAAACCGTGCCACTGCACTTGTTGTTGCTCATATGGACAAGCCGACTTCACAGCTCGGAGGCCAAACTGCCTTCACCCAATCACAGGTGGAGTTAGAAAACATTACTTTTACCTTCGAGGGTTTTGGAAACAGAGCTGGTCATGATGCTTTCAGGGTCGAGACCACCAGCGTGGTCTCGGCCTACGAAAGCATTCATGAAGATATTTTCAACTCCGCCAGAGAAAGAGGCGCAAGTTTGATTCTCCTTCCATTCCACAAACACTTGAGTAACGGTAATTTGCTTGAAACAACGAACTCCGTGTATAAGGATATAAACAAGAGCGTAATGCAAAATGCGCCTTGTTCTGTGGGAATCTTCGTTGATCGGAATCTTGGATCGTTTTCCAAAACCAAGCTTCGTATTCTTATGGTGTTTGTTGGAGGCCCAAACGATCGCGAAGCTTTAGCGATTGCATGGAAGATGGCTAGGCATCGTAATGTTGAACTATCGATGATTCGAATTCGGTTGTTTGATGAACCTGTGGAAATAGAATCAACTCATTTTGAAGAAGCACGTGGGATATTATCGTATGTAATGGATGAAGAGAAGCAAAGGGAGTTGGATGAAGGGTATATAAGTAAATTCAGATACACTGCTGTGAACAATGAGGATTCTATATCTTACTCGGAGGTTGATGTCCATACAAGTGAAGATGTTCCTAGAGTCTTGAAGGAACTTGATCAGAACGGTTGTGATTTGTACATTGTTGGACGAGGGTATTATAGGAACTCTAAAATATTCTCAAACTTATTGGAATGGTGTGAATGTGTGGAATTAGGAGTTATTGGGGATATTTTAGCATCAAATATTTTTGGTTCAAGCTCTTCTGTTTTAGTTGTTCAGCAATATGGTTTTGGAGGAATGGAATTTGGGAAGAAGAACTCTGCAAAACTCATTGTCAAGACAGAATAA 2430 0.4004 MGDVLPLACYPVSVSEANRIWQTGNIIDSELPTLAFQVAYTVFVACLFFLLFKPFHQSRLITYVFAGFLLTPPLLRRFEFLFALVYPITGIMNVEVISNFGLIYYAFLNGLEMNLDTILKAKKEATSIAAAGIIFPMIAGSGLYALHRRFYINNIFKLEEVSTHVYLIWSLVLSVTGFPNLVEILSDLKLHYTGLGKVALTAAMIIDTYNWILFTLLIPFSTYSSNAIYSVLSTIMFVIVCIVLVRPIITKFVERKTEENELDEYQLLFVVMGLLLCSYVTDIIGTHGIVGAFVYGLILPRGRFADSVMAVSDDFGTGFLASIYFSGTGMRFLISSVFSHANWKLTFLVVILLCVTKILGTLFVTSLFGRPAKDGFAIGLLLNTKGALALILLSIAWDKMIFFAPTYAVLISAVLLMTMVVSPIINLIFKPRKRFQQTKLRTIERLRIDAELRMLACVHTNQHATSMINIIELFSATRLSPVYVFGLYLVEITNRATALVVAHMDKPTSQLGGQTAFTQSQVELENITFTFEGFGNRAGHDAFRVETTSVVSAYESIHEDIFNSARERGASLILLPFHKHLSNGNLLETTNSVYKDINKSVMQNAPCSVGIFVDRNLGSFSKTKLRILMVFVGGPNDREALAIAWKMARHRNVELSMIRIRLFDEPVEIESTHFEEARGILSYVMDEEKQRELDEGYISKFRYTAVNNEDSISYSEVDVHTSEDVPRVLKELDQNGCDLYIVGRGYYRNSKIFSNLLEWCECVELGVIGDILASNIFGSSSSVLVVQQYGFGGMEFGKKNSAKLIVKTE* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3256 809 Pfam Sodium/hydrogen exchanger family 41 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo16g3256 809 Gene3D - 488 786 - -
Amo16g3256 809 PANTHER CATION/H+ EXCHANGER 3 15 800 - -
Amo16g3256 809 Gene3D - 33 439 IPR038770 -
Amo16g3256 809 PANTHER CATION/H + ANTIPORTER 15 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3256 Amo-Chr16 137948000 137951771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3256 9 789 Antiporter Super Family AT2G13620 34.931 8.93e-171 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3256 - - gmx:100804266 1033.48