Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3252 ATGGAGGATGAGGTGATCATGGAGAATTTGTGGAGTTCTCGCCTCTCGTGTATTTCAAAGACTTATGATGCTGTTATTGGAGATATTACCATACTAGAGAAAAGATTGTCATATGTGGACTTCACTGTGCCATATGCAGAATCAAGATTATCAATGTTAGTTCTAGCAAAGTCTGAAGAATCAGCATGGATGTTCACCGAGCCATTTACCTGGCAACTTTGGACAGTTGCAGGAGCCATCTTGATCTATACAATGTTGGTGGTTTCACTACAAGAAACACCATTAAAATCAACAGGTAGGCTGTCGATAATATTAAAAATCGACGGTGGATGA 333 0.3964 MEDEVIMENLWSSRLSCISKTYDAVIGDITILEKRLSYVDFTVPYAESRLSMLVLAKSEESAWMFTEPFTWQLWTVAGAILIYTMLVVSLQETPLKSTGRLSIILKIDGG* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3252 110 SUPERFAMILY Periplasmic binding protein-like II 18 80 - -
Amo16g3252 110 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 19 92 - -
Amo16g3252 110 Pfam Bacterial extracellular solute-binding proteins, family 3 19 58 IPR001638 -
Amo16g3252 110 Gene3D - 15 79 - -
Amo16g3252 110 PANTHER GLUTAMATE RECEPTOR 19 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3252 Amo-Chr16 137821496 137823019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3252 22 88 Ion Channels AT2G29120 41.791 4.19e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3252 - - ahf:114924593 128.642