Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3236 ATGGAGTTGTTAGCAAGGATAGAATTATTAATAGGTGTGGTTATGGTTGCTTCGATGATTATGAGTAAGGGTTGTGAAGGGCAATTAGTGGAGAATTTCTACAGTTCAAGTTGTCCAAACGTGGAATCCATAGTTAGAGAGGCAGTGACCAATAAATTTACTCAGACTCTCACAACTGGACAAGCAACCCTCCGTCTATTTCTCCATGACTGCTTTGTTCAGGGTTGCGATGCTTCTGTGATGATATCGTCGGCAAATGGGGACGCAGAGAAGGATCACTCAGAAAATCTTTCACTTCCAGGAGATGGATTCGACACTGTCATCAAAGCAAAACAAGCTGTTGAAGCTTCATGCCCTGGTGTCGTCTCATGCGCTGACATTTTGGCCCTTGCTACCAGAGATGTTATTTCCTTCCTAGGGGGACCATCATTCAACGTAGAACTTGGACGCAAAGATGGGCTTATTTCGAAATCATCAAACGTTGAAGGAAACCTTCCAAAATCAAGTTTCAATTTAAAGCAGCTAAACACAATGTTCTCAAATCACAACTTGACCCAAACCGACATGATAGCACTCTCAGGAGCACACACCATAGGCTTCTCACATTGCAACGAGTTCTCTAACCGTTTATATTCATTCTCTGCGTCCTCACCGCTGGACCCTACTCTCGACTCCAACTACGCCGAACAGTTAAAGACACAGTGCCCTCAAAACCCTGATCCACAGGTTGTGGTTGCTCTTGATCCCGATTCCTCCTCCAGTTTCGACAACAAGTATTACCGGAACTTGGTGGCCGGAAAAGGGTTGTTGAGATCGGATCAGGTTTTGTACACGGACCCTGCGTCGCGGTCCACGGTGGCTGAGTTTGCCAATAATGCTGATGCTTTTAATGAAGCGTTTGTTGCCGCCATGAGGAAGCTTGGAAGGGTGGGGGTGAAGATTGGTAAGGAAGGAGAGGTTAGAAGAGACTGCACTAAATTCAATTAA 987 0.4549 MELLARIELLIGVVMVASMIMSKGCEGQLVENFYSSSCPNVESIVREAVTNKFTQTLTTGQATLRLFLHDCFVQGCDASVMISSANGDAEKDHSENLSLPGDGFDTVIKAKQAVEASCPGVVSCADILALATRDVISFLGGPSFNVELGRKDGLISKSSNVEGNLPKSSFNLKQLNTMFSNHNLTQTDMIALSGAHTIGFSHCNEFSNRLYSFSASSPLDPTLDSNYAEQLKTQCPQNPDPQVVVALDPDSSSSFDNKYYRNLVAGKGLLRSDQVLYTDPASRSTVAEFANNADAFNEAFVAAMRKLGRVGVKIGKEGEVRRDCTKFN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3236 328 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601|GO:0042744
Amo16g3236 328 Gene3D - 32 328 - -
Amo16g3236 328 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PANTHER PEROXIDASE 13 328 - -
Amo16g3236 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Amo16g3236 328 Gene3D Peroxidase, domain 2 166 307 - -
Amo16g3236 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 PANTHER - 13 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo16g3236 328 Pfam Peroxidase 45 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3236 Amo-Chr16 137373170 137377892 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3236 27 328 Peroxidase AT5G14130 61.921 5.62e-139 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3236 K00430 - gmx:100791275 491.886