Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo16g3232 | ATGGCCATGGAAGTTGACCCTAATCTTGAGTCAACATCCTTCTCCTTCTGGAAACCCCTTCGTCGTAGGTTCAACCCTGACTCTCCTTTCTTCGCTTCTGGCAACCTCCAACGTGAACTGCTAGCCAAACAGGTTGCGTTGGAATTAACGGAAGAGAATGAACAACTTGAGGATTGCATCCAAGATGGAAGGGAAGTCTTTTGCCCAATTGTTGGTTGTGGAACACGCCTGACTTCAATTGAGGATTTTGAAAATCACTATAATGTAAGGCATACTGCATCCTGTTCAGTTTGCTCCAGAGTCTACCCAACTTCTCGTCTGCTCAGCATACACTTATCTGAAGTTCATGATTCTTTCTTCCAGGCGAAACTTGCACGCGGCTATGATGTGTATGAATGCTTAGTGGAAGGCTGTGGTTTGAAATTCAAAACCTACAGTAGCAGGCAGCAGCATCTGGTTGACAAGCACAAATTCCCAACCTCATTCGAATTTTTCAAGAAGTCTCGACCATCAAAGAAACAGAGGTTAAAGTCTCAGCGCAAGCAATCTGTTCAGAAGGAGGATGCATCAGAAACAATGGAAGTCGAAAATGCAGCCATAGATGACCTCACTTCAGCAGTCTCTAGAATGAGCACTTCTGACTCCACTCCTTCCTCTATCAGCTTTGGTCGCCGCAACAAAGGGTTGACCTTTGCTCCTCGAGTTGTTCAGCAAAAAACCCAGCAAAGAGATAATTAG | 738 | 0.4499 | MAMEVDPNLESTSFSFWKPLRRRFNPDSPFFASGNLQRELLAKQVALELTEENEQLEDCIQDGREVFCPIVGCGTRLTSIEDFENHYNVRHTASCSVCSRVYPTSRLLSIHLSEVHDSFFQAKLARGYDVYECLVEGCGLKFKTYSSRQQHLVDKHKFPTSFEFFKKSRPSKKQRLKSQRKQSVQKEDASETMEVENAAIDDLTSAVSRMSTSDSTPSSISFGRRNKGLTFAPRVVQQKTQQRDN* | 246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo16g3232 | 245 | PANTHER | UNCHARACTERIZED | 10 | 241 | IPR039258 | - | |
Amo16g3232 | 245 | MobiDBLite | consensus disorder prediction | 173 | 245 | - | - | |
Amo16g3232 | 245 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 133 | 156 | IPR013087 | - | |
Amo16g3232 | 245 | MobiDBLite | consensus disorder prediction | 204 | 225 | - | - | |
Amo16g3232 | 245 | SMART | c2h2final6 | 93 | 116 | IPR013087 | - | |
Amo16g3232 | 245 | SMART | c2h2final6 | 66 | 91 | IPR013087 | - | |
Amo16g3232 | 245 | SMART | c2h2final6 | 131 | 156 | IPR013087 | - | |
Amo16g3232 | 245 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 95 | 116 | IPR013087 | - | |
Amo16g3232 | 245 | PANTHER | ZINC FINGER PROTEIN 511 | 10 | 241 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo16g3232 | Amo-Chr16 | 137207460 | 137210438 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo16g3232 | 2 | 239 | C2H2 Transcription Factor Family | AT5G14140 | 61.847 | 2.12e-106 | 306 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Amo16g3232 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo16g3232 | - | - | ahf:112697187 | 464.151 |